Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_4285
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Entry
ECOK1_4285 CDS
T01997
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eih03000
]
ECOK1_4285
Transcription factors [BR:
eih03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECOK1_4285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ADE90618
LinkDB
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Position
complement(4398857..4399702)
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AA seq
281 aa
AA seq
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MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK
LGYQGYYHLKIALAKEVINPDNSYPDNTDFTDITSLATFLLKKQAEDLIQSTQFFNAEVL
ESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDL
AIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD
STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaataacataaccgtaaaaagtctgattcaaagcaattaccctacactgcatcaggcg
gaaaaaaaggtcgctgactatattcttagccacgcacatgaagtcgtgaactatagtgtc
actgaactatcagaaaaaagccatgccagtgaagcgactatcgtacgcacctgtaagaaa
ttaggttatcagggttattaccatttaaaaattgcattagcaaaagaagtcattaatcct
gacaatagctatcctgataataccgattttaccgatataacgtcgctggccacattttta
ttaaaaaaacaggccgaagatttaatacaatcaacgcaattttttaatgccgaagtgctt
gagtccattctcaaactacttgctaattgcgacactattttcttttttgctgccggaaat
tcaaaccctctggccgtttatggtgcttataaattcagccaactcggattaaaaaccgtt
gttcacgtcagcccggaaatgcaaattaatgcggcatattctatggggaaacgtgacctg
gcgattggtatttctaactctggcagcaccaacttaatggtcgatatctttaaagtggtg
aaagagcgcggtgccaaatccgtttgtatcactaactatattaaatctccgttatcaaaa
ctctccacccatcaactcaataccgcggtcagcgataaaatcttctttgaagccttcgac
tccactcgcgttccggcaatgggcgttattgatatgctggtgctgttgtttatgtataaa
aacaaggcgcattacgagaaataccgcacccgtgaagagtttcttggctcccgtttcaag
gggtaa
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