Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_4403
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Entry
ECOK1_4403 CDS
T01997
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Pathway
eih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECOK1_4403 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eih03400
]
ECOK1_4403 (priA)
Enzymes [BR:
eih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECOK1_4403 (priA)
DNA repair and recombination proteins [BR:
eih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECOK1_4403 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
ADE88983
LinkDB
All DBs
Position
complement(4513732..4515930)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGSRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQRKIWRDQVAELEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LASPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggagtcgcgtgcgcgtgccgtttggcaaacaacag
gagcgtatcggggttgtggtgtcagtgagcgatgtcagtgagctgccgcttaacgagctg
aaagcggtagttgaagtgctggacgttgagccggtatttactcactctgtctggcgatta
ctgctctgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggtcaggcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcgctggcagcgttacggcaacgcaaaatctggcgtgatcaggtcgcggaacttgaattt
aatgatgccgcgttgcaggcactgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgagcggttgcggttgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagtgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgccccggtggaagttctgcattccggcctg
aacgacagcgagcgtctttcggcgtggttgaaagcgaaaaatggcgaggcggcgattgtc
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgttattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgcgcgcatagcgagcaaatcccaattattcttggctccgcaacgcccgca
ctggaaacgttatgcaacgtgcagcagaaaaaataccgcctgctgcgcctgacccgtcgg
gcgggcaatgcgcgcccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccgacaaccag
gttatcctctttcttaaccgccggggttttgcgcctgcgctactgtgccacgactgtggt
tggatagccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgccaccattgcgacagtcagcgtccggtgccgcgccagtgcccttcttgcggt
tccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgctcgcgccg
ttgttccctggtgtccccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacaacaactggcggaagtacatcgcggtggcgcgaggattttgattggcacgcaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcattactggacgtggac
ggcgcgctgttttctgccgatttccgctcggcggagcgttttgcccagctttacacccaa
gtggcaggccgtgccggacgtgccggtaaacagggcgaagtagttctgcaaacgcaccat
cctgaacatccgctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcactggctgaacgacgcatgatgcagctgccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctcatt
ctcgccagcccactggcagacgagaaactgtgggttctcggtccggttccggcgctggcc
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttacagcacatcatcaatggtacgctggcgcttattaatacaataccggattcccgcaag
gtgaaatgggtgctggatgtcgatccgattgagggttaa
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