Encephalitozoon intestinalis: Eint_030180
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Entry
Eint_030180 CDS
T02238
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ein
Encephalitozoon intestinalis
Pathway
ein03020
RNA polymerase
ein03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Eint_030180
09124 Replication and repair
03420 Nucleotide excision repair
Eint_030180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ein03021
]
Eint_030180
03400 DNA repair and recombination proteins [BR:
ein03400
]
Eint_030180
Enzymes [BR:
ein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Eint_030180
Transcription machinery [BR:
ein03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Eint_030180
DNA repair and recombination proteins [BR:
ein03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Eint_030180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
RNA_pol_Rpb1_6
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
9698859
NCBI-ProteinID:
XP_003072524
UniProt:
E0S629
LinkDB
All DBs
Position
III:complement(21259..25890)
Genome browser
AA seq
1543 aa
AA seq
DB search
MFEEKVKKQIKSIQFGLFSPEEIRNGSVALIVHPEVMEGGVPKTGGLIDLRMGTTDRMYL
CQSCGGDNFSCPGHFGHIELTKPMFHVGYISKIKKVLECVCFYCSKIKVSKRGVRSTLNN
VWSMSKSKLVCEGEILDNGKSGCGNRQPVIKKEGLTLVAFMKGEESNEGKVMLNGERVYS
IFKKISDEDCVYMGFDLKYSRPEWMILTVLLVPPPAVRPSIVMEGSLRGEDDLTHKLADI
IKSNGYLKKYEQEGAPGHIVRDYEQLLQFHVATLIDNELGGQPQALQKSGRPLKSLSARL
KGKEGRIRGNLMGKRVDFSARTVITPDPNISLEEVGVPLEVAKIHTFPERVTSFNIDKLE
KLVRAGPNEHPGANYVLRSDGQKIDLNFNRSDIRLEEGYIVERHMQSGDVVLFNRQPSLH
KMSMMAHYARVMGDKTFRLNLSVTSPYNADFDGDEMNLHMPQSYTSKAELEELALVSKQI
ISPQSNKPVMGIVQDTLTGLRLFTLRDTFLNEREVMLLLYAVNIEFSDTAPGETTYMGVN
RTKDYDIMKVLKNPAIAKPMKLWTGKQILSFVLPNLNYTGFSSEHNEDDNENINDTKVII
QNGYIHSGVIDKKAAGATQGGLIHIIFNDFGPKRAAQFFNGVQKMINIFMTGIHTFSIGI
GDTIADAKTVKMVDEAIRKAKEEVSIIIENARQNRLERLPGMTMKESFESHLNLVLNRAR
DVSGTSAQRSLSGNNNMKTMVLAGSKGSFINISQVTACVGQQNVEGKRIPFGFSQRTLPH
FVKDDYTGKSRGFVENSYLTGLDPEEFFFHAMGGREGLIDTAIKTAETGYIQRRLVKALE
DAIVRQDESVRSGNGLVYQVKYGEDGFDATFLESQKVDVKNFTKRYYIDMFGNGELGIKQ
GQVSEEVYGILCSDVDLQKLLDQEYEWLVEEIFEGPPISSIGEIDIEHDYRVKDIYQNAV
MSPCNLTRLLASAKREFHLSAGDVSPYYILEAHKNLMTSNKILNVLIRTNLSVKRILLEH
KLNTEAFNWVVEMIRAKILKAKITPNEMVGTLAAQSVGEPATQMTLNTFHLAGVSSTVTM
GVPRLKEIFNVTKNLKTPSMKIYLDKEHCKTIELAKTIQNEIECLTVKDLCLSSEIYYDP
EITSTEIADDKDFVEAYFEFPDDDVDFSSLTPFLIRLVVDRAKLVGRGINLEYVATFISK
ELGNGAHVICSDENAVDMVIRIRIAKSEDESLNFYMVVLNSLLKFQLGGYKNIKKVYISE
DKNRKEWYLQTDGICLPQILGNPSVNSQLTTSNDLIEIAETLGIEAARESILRELAIVID
GNGSYVNYRHMSLLADVMTMRGYLCGITRHGVNKVGAGALKRSSFEETVEILLDAALVSE
KNLCRGITENIMMGQLAPMGTGNVEIMLDVKKLDKAIPLSNPVFKPNEPVTPVISTPSSD
SFSISSGNWSPTHLEMAYPRDLSGRLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSVLTPNFSNKNKSKDQDGNKKRRNEEPF
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggagaaagtaaaaaaacagatcaagtcaatacagtttgggctgttttcccca
gaggaaataaggaatggaagtgttgctttaattgtgcatcccgaggtcatggaaggggga
gttccaaagactggaggattgatagatctgaggatgggaacaacagataggatgtatctt
tgccaaagctgtggaggagataacttctcgtgtccaggtcactttggacatatcgaactt
accaagcccatgttccatgttggttatatttccaagattaagaaggttttggagtgtgtt
tgtttctactgttccaagatcaaagtatcaaaaagaggagtaaggtcgacgttgaacaat
gtatggagcatgagcaaaagcaagttggtatgcgagggagagattcttgacaatggaaag
agcggctgtgggaacagacaacctgttattaaaaaggagggcttaactcttgttgctttc
atgaagggagaagaaagcaacgaaggaaaagtgatgctgaatggggaaagggtgtatagc
atattcaagaagataagcgatgaggactgtgtttatatggggtttgacctaaagtatagc
aggcccgagtggatgatacttactgtattgctagttcctccaccggcagtaaggccttcg
attgtgatggagggctcattgagaggggaggacgatcttacgcacaagcttgcagacatc
ataaaatccaatggatatttaaagaaatatgagcaggagggagcaccaggccacattgtt
cgggattatgaacagctacttcagttccatgttgccacattgatagataatgagcttgga
ggacagcctcaagcactacagaagagtggaaggccactgaagtcgctatcagctagactg
aagggcaaagagggaaggattcgagggaatcttatggggaaaagagtagactttagtgca
aggacggtgataacacctgatccaaacatatctctggaggaggttggagttcctcttgaa
gtggcaaagatccatacttttccagaaagagttacatcattcaacatagataagctggag
aagcttgttcgagcagggcccaacgagcatccaggagctaactatgttcttaggtctgat
ggacagaagatcgatctgaacttcaatagaagtgacataaggctagaagaggggtatatt
gtggaaagacatatgcaatctggggatgttgttctcttcaatagacagccttcgctccat
aagatgtcgatgatggcacattatgctagggtgatgggggacaaaaccttcaggctgaat
ctcagtgtcacatctccttataatgcagattttgacggagatgaaatgaatcttcatatg
cctcagagctatacatccaaggcagaactagaggagctggctcttgtatctaagcaaatt
atttctcctcaatccaataagcctgttatgggcattgtgcaggacacacttacgggtctg
agactgtttactcttcgggatacctttctgaacgaaagagaagttatgctgctattgtat
gcagtgaatatagagtttagtgacactgctcctggagaaaccacttacatgggggtgaat
agaacaaaggactacgatattatgaaggtgctgaagaatccagcaatagccaaacctatg
aagctttggacgggaaagcagattctaagctttgtacttccaaacctaaactataccgga
ttttcttcggaacacaatgaagatgacaatgaaaacatcaatgacaccaaagttattata
cagaatgggtatattcactctggagttattgataaaaaggcagcaggagcaactcaagga
ggacttatccacataatattcaacgactttgggccaaaaagagcagcccagttcttcaat
ggagttcagaagatgatcaatattttcatgaccggaatccatacgttttcaataggaata
ggagacaccattgcagatgccaaaacggtaaagatggttgatgaagccatccgaaaggct
aaggaggaggtttctataatcattgaaaatgcacgtcaaaatcggcttgaaagacttcct
ggaatgacgatgaaggaaagctttgaaagccatttaaaccttgtactgaacagagcaaga
gatgtaagtggaacaagtgcacaaagaagcctcagcggaaataacaatatgaagaccatg
gtccttgctggatcgaaggggtcttttataaacatatcacaagttacagcctgtgtagga
cagcagaatgttgaaggaaaacggattccttttgggttttcccagaggacacttccacat
tttgtcaaagacgactatacaggaaaaagtcgaggatttgttgagaacagttatttgaca
ggtcttgatcccgaggagttttttttccatgcaatgggaggaagagagggtttgatagat
acagccatcaagactgccgagacaggatatatccaaagaagacttgtgaaagcgcttgaa
gatgccattgtaaggcaagatgaaagtgtcaggagcgggaatggactggtataccaagta
aaatatggagaagacggatttgatgccactttcttggagtcacagaaggtcgatgtaaaa
aattttacaaaaaggtattatattgatatgtttggaaatggagagttgggaattaagcaa
ggacaagtttcggaggaggtttacggaattctttgctctgacgttgatctacagaagctc
ctggatcaagagtatgagtggttagtcgaggagatatttgaggggcctccaatatcttct
ataggagaaatagacatagagcatgactatcgagtcaaagacatttaccaaaatgctgtg
atgagcccttgcaacctgactcgtctgctagcatcggcaaagagagaattccatctttcg
gccggagatgtttctccttattacatacttgaggcacataagaaccttatgacttccaac
aaaattctgaatgtactcataagaaccaatttgagtgtaaaaagaatccttcttgagcac
aagctaaatacggaggcattcaattgggtagtggaaatgatacgcgcaaagattctaaag
gctaagataacgccaaacgaaatggtggggacattagcagcacagtcagttggagagcct
gcaacacaaatgacactgaatacattccaccttgccggggtttcttccactgtgactatg
ggagtccctagactcaaagagatttttaatgtaacaaagaacttgaaaacaccatccatg
aagatatatcttgataaggagcactgtaaaacaattgaattggcaaagacaatccagaat
gagatagagtgccttacggtgaaggacctgtgcctctcttccgaaatatattatgaccca
gaaataacaagtacagagattgcagatgacaaggactttgtagaagcgtactttgagttt
ccagacgatgacgtggacttctcttccctgacacccttcttgataaggcttgttgtagat
cgagctaagcttgttggaagaggaataaacctagaatatgttgcaacatttatcagcaag
gagttggggaatggagcccatgtgatctgcagtgatgagaacgcagttgatatggtgata
agaatccggattgcaaaatcagaagacgaatctttaaacttctacatggtagtattgaac
tctctgctgaagtttcagttgggaggatataaaaacattaagaaggtttatattagtgag
gacaagaatcggaaagaatggtatctacagactgacgggatctgtctcccccaaattcta
ggaaacccttcagttaacagccagcttacaacctctaatgatctcatcgagattgcagaa
accttaggaatagaggcagcgagagaatctatcttaagagagttggccatagtaatagat
ggaaatgggtcttatgtcaactatcgacacatgagtcttctagctgatgtgatgactatg
agggggtatctctgcggaataactcgtcacggtgtcaataaggttggggctggtgcgttg
aaaagaagctcgtttgaagaaacggtggaaatccttttggatgcagcactagtttcggag
aagaacctatgtagagggataacggagaacatcatgatggggcagctagcacccatgggg
actggaaatgtcgagattatgctggacgtgaagaaactggataaagccattccattatct
aatccagtgttcaagcctaatgagcctgtaactccggtgattagtactccttcatcagat
tccttctcaattagtagcgggaactggagcccaacacatctcgaaatggcatatcctaga
gacctaagtggaaggctatctcccactagcccttcctattctccaacgagtccatcttac
tcccctacaagcccttcctattctccgacgagtccatcttactcccctacaagcccttcc
tattctccgacgagtccatcatattctccaacgagtccatcttactcagtactaacaccc
aacttctcaaacaaaaataagagtaaggatcaagatggcaacaaaaaacgaaggaatgag
gaacctttctaa
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integrated database retrieval system
