Encephalitozoon intestinalis: Eint_050980
Help
Entry
Eint_050980 CDS
T02238
Name
(RefSeq) putative Ski2 RNA helicase
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ein
Encephalitozoon intestinalis
Brite
KEGG Orthology (KO) [BR:
ein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ein03019
]
Eint_050980
Enzymes [BR:
ein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Eint_050980
Messenger RNA biogenesis [BR:
ein03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
Eint_050980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
9699226
NCBI-ProteinID:
XP_003072905
UniProt:
E0S7B7
LinkDB
All DBs
Position
V:complement(118745..122752)
Genome browser
AA seq
1335 aa
AA seq
DB search
MDYEEYFRTKHPVYTNISAQFTGIGHLIVDGGALISSISKRYGVSYESLPLHTYIHGIRF
MMSNLQKVGFDNIMMFFRAESGHRRVIKECLMRRFDCMDISKVYEYIENERVALVLGGTE
KGELEFLYECLGISLYCGVLDQMEFRIPSVYAFVYSPLDRKTGRKATKPLDEESDEGSDG
DVDTEIKKINAEMSIETIDRLFKTRTKSFGPCKLSVPMELCRKLVWMFRNESPERTMDFD
GRLLLGEMEMGEDPKCMEYQDLIGNNHRDIESKNLEMELDLLISGKEVSPASAAAHMKNV
RKSAQSLFDGKLLYTPIVRTKGGKPPKISQKQKQIIEENEKRMKEERKVKEASWLRNFFG
KYKVLDYQGKRSLLESVKRDGSGIYRRVLLLKIEFYADMWNLKKRSEDCDEGIIVPCYLS
CMEYIREFGRLGKEDQAPDAELEFVFQNLIGCGFEATVRELVEKNGLEGLNLEFFTDDTS
APSEFDICFQLKHTGDKLQRSVNSKKDPRVLFNPDEWQVRLLDVVDQNKSAVISAPTSAG
KTFICFYAIEKVLKESDTDVVIFCLPTKALVNQVSADIYARFTPKVNSKTFLQGSLMKEF
SIAPWNCQVLIVIPSLLESVLNTPPKGFIERVRYIIIDEVHKISSEEMGIPIERIIHLSP
CPMLVLSATLGNIEGFYGWMKKIEKEKGRECELVSYDERYCELKPYVYSHGFEPKMVAIN
NLFAYSYSHIKKFGFGNDMSFLPEELLHLYDSICAVLSKDQEHLIDRITPENFFKSNIVT
KKEVREYGKYLLETFQEMIEGDLLNEKQVKYVYKLQTKEARKAFETVVDYSTDYLLENIL
DLLMELKERGMFPCIVFNTDRDFASKLALKVYRQLESQDMEKKKNKLIEKMKKEAKRTRD
VEKTKESWIEESIAAEKSFQMRSDKKNIKYTFLDPLTKLTDYEISEETKFIKNTDFEFID
MLYRGIGVHHAHLNRKYRSLVEILFRQKHLQVLFATETLALGINMPCRTVVFAGDSLQLD
PMNYKQMAGRAGRRGFDTLGNVVFMGIPKQRVQNLMVSLLPNIKGVYTYTNTSFVGFNMK
DSLVKNPLLESTLYSNQDELGRSIGKLSISENSSSSYDLSNIYESEEKRAELVDYQLRLL
NPYFLPRSYLCDLVIGNRDSDPEILSFALLLESRVLPLDPTTLMNALAHFFETKPLLFDM
GCTLPPLDPAVYEFCKKINSISKACVTRLYSPILKSLQEMSDTPLHIIDSFLSVKNLDKV
KNSYLVDFFRHGNWNRIAEENCIGTGELFKSLNVVNNVILSLIKLYDTYGLCDEDRSKIV
RFHSMFEPKFKAMFA
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaagaatacttcaggacaaagcatccggtgtatacgaacatctctgcacag
ttcacagggatagggcatctcatagtggatggaggggctcttataagcagtatcagcaag
agatatggggttagctatgagagtcttcctctacatacatacatccatgggatccgattt
atgatgtcgaacctacagaaggttgggtttgataacatcatgatgtttttccgggcagag
tctgggcacagaagggttatcaaggaatgtttgatgagaagatttgattgcatggacatt
tcaaaggtttatgagtacattgagaatgaaagagttgctcttgttcttggagggactgag
aagggcgagcttgagttcctgtacgaatgtcttggaattagcctgtactgtggggttcta
gatcagatggaatttaggatcccgagtgtctatgcatttgtctattctcctcttgaccgt
aagaccgggaggaaggccacgaaacctttagacgaggaaagcgatgaaggaagcgacggg
gatgtggacacggaaattaagaagattaatgcagaaatgagcattgagacaattgacaga
ttgttcaagacaagaaccaagagttttgggccttgcaagctttcggtgcctatggaatta
tgcagaaagcttgtctggatgttcaggaatgaaagtcctgagaggaccatggactttgat
gggaggcttcttcttggggaaatggagatgggagaagatccaaagtgtatggaatatcaa
gacttgattggaaacaaccacagggatattgaaagtaaaaatctcgagatggaattagac
ttgcttataagtggaaaggaggtgagcccagcatcggcagcagcacatatgaagaatgta
agaaagtcagcacagtctctgtttgacgggaagctattatacactccgattgtcaggacc
aagggagggaagcctcctaaaatatcacagaagcaaaagcaaattatagaagaaaatgag
aaaagaatgaaggaagaaagaaaagtaaaggaggcatcttggctccggaacttttttgga
aagtacaaggttcttgactaccaaggaaagagaagtctgttggaaagcgtcaaacgggac
gggtctgggatctacaggagggttcttctcctgaagatagagttctatgcagacatgtgg
aatcttaagaagagatcggaagattgtgatgaaggtatcattgtgccctgctacctaagc
tgcatggagtacatccgtgaatttggaaggctcgggaaggaggatcaggcacccgatgca
gagttggagtttgtgttccagaatcttattggatgtggatttgaggccactgttagagag
ctagttgagaagaatggcctggaaggcctgaatcttgaattctttactgacgacacaagt
gcgcctagtgagtttgacatttgcttccaactgaagcatactggagacaagcttcaaaga
agtgtgaattcaaagaaggatccacgtgttctgttcaatccagacgagtggcaggtgcga
cttcttgatgttgtcgaccagaacaagagtgcagtaatatctgcaccgacaagtgctgga
aagacgtttatctgcttctacgcaattgagaaggttctgaaggagagtgacacagacgtg
gtaatcttctgccttcctaccaaggcccttgtcaatcaggtgtctgcagacatctatgcc
cggtttactccgaaagtgaattccaagaccttcttacaagggagccttatgaaggagttt
tcaatagcaccttggaactgccaggtgctaatagtgattccttctcttctggagtctgtg
ctgaacacacccccgaagggctttatcgaaagagtcaggtatataattattgatgaagtg
cataagattagcagcgaggagatggggattccgattgagaggataattcatctgtcgcca
tgtcctatgctggttcttagtgcaacgcttggaaacatcgagggattttatggatggatg
aagaagattgagaaagaaaagggaagggaatgcgagcttgtttcctatgatgagagatac
tgcgagctgaagccttatgtctactcccatggatttgagcccaagatggtggcgataaac
aatctgtttgcatattcgtattcacatatcaagaagtttgggtttggaaatgacatgagc
ttccttcccgaagagcttctccatctatatgattcgatatgtgctgtgcttagtaaggat
caagagcatcttatagacagaataacgcccgaaaactttttcaaaagtaacatagtgacg
aagaaagaggttcgcgagtatggaaagtatcttcttgaaacttttcaggagatgattgaa
ggagacctactaaatgaaaagcaggtgaagtatgtttataagttacagacaaaggaagca
agaaaggcttttgagactgttgtggactatagcaccgattatcttcttgaaaacattctg
gatcttcttatggagcttaaggagcggggtatgtttccatgcattgtctttaacacagac
agggactttgctagtaagcttgccctgaaagtatacaggcagctagagtctcaggatatg
gaaaagaagaagaacaagctaatagaaaagatgaagaaggaagcaaagaggaccagagat
gtggagaagacaaaggaaagctggattgaagagtcgattgcagcagagaagagcttccag
atgaggagtgataagaagaacatcaaatatacctttcttgatcctcttacaaagctgact
gattacgagatctcggaagagacgaagttcataaagaacacagactttgagtttattgac
atgctttatcgcggaataggggttcaccatgcacatctgaataggaagtatagatctctt
gttgaaatcctgttcaggcagaagcacctgcaagttctgtttgcaacggagactctagct
cttggaattaacatgccctgcagaaccgttgtttttgccggggactccttgcagctggac
ccaatgaattacaagcaaatggcggggagagctggaagaaggggttttgacactctagga
aatgtagtgttcatgggaataccaaagcaacgggtgcagaacctcatggtgtctctcctg
ccgaacataaaaggtgtttacacctacacaaacacaagctttgtcgggtttaatatgaag
gattcccttgtaaagaatcctttgctcgagagtactctctatagcaatcaagacgagctt
ggaaggtctattggaaagctttccatatctgagaacagctcatcttcttacgacctaagt
aacatatatgaatccgaggaaaagagagccgagcttgtagactaccaactcagactcctc
aatccatacttcctcccaaggtcttatctttgcgaccttgttataggaaacagggactct
gatccagagatcctgtcgtttgcacttcttctggagagcagagtccttcctctggaccct
accacccttatgaatgcactggcacatttctttgaaacaaagcctcttctatttgatatg
ggatgcacgctccctcctttggacccggctgtttacgagttttgcaagaaaatcaacagt
atctccaaggcttgcgtcacccggctatactctccaattctgaagtctttgcaggagatg
tcggatacaccccttcatattatcgactcctttttaagtgtgaagaatctcgacaaggta
aagaactcatatctagtagacttcttccgccacggaaattggaaccgaattgcagaagag
aactgcattggaacaggagagcttttcaagtcgctgaatgtagttaacaatgttattctg
tctcttataaagctgtacgacacctatggtctatgtgacgaggacagatcaaagattgtg
cgcttccattctatgttcgagcccaagttcaaggccatgttcgcctag
DBGET
integrated database retrieval system
