Encephalitozoon intestinalis: Eint_101290
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Entry
Eint_101290 CDS
T02238
Name
(RefSeq) Rrp4-like RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
ein
Encephalitozoon intestinalis
Pathway
ein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Eint_101290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ein03019
]
Eint_101290
Messenger RNA biogenesis [BR:
ein03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Eint_101290
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Eint_101290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
RRP40_S1
CvfB_2nd
Motif
Other DBs
NCBI-GeneID:
9699520
NCBI-ProteinID:
XP_003073814
UniProt:
E0S9R9
LinkDB
All DBs
Position
X:complement(168756..169427)
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AA seq
223 aa
AA seq
DB search
MKTLFLPGEDVLESDGYIRGHGTQLRGSNIASTYFGRVKITNKLVSIDPISSMKYNPEVG
NVVVGRVIGIHNKKWKVELSSRGDAYLGLSAINLPGTVQRRKQESDEMSMRDFFDINDLV
VSEVQKVNRNGTIALHTRNDMYGKLGQGLLVFAPHFLLEPLRTRFLLHGNIKVIVGCNGY
IWVGKTREDPMAFIEIASLVSKIKTMVSQNRYINMEELLEKNS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttgtttcttcccggggaagacgttctagagtccgatgggtatataagaggg
catggaacacagcttagaggaagcaatatagcatcaacctactttggaagggtgaagatc
acaaacaagctcgtctccatcgatcctatttcttccatgaagtacaatccagaggttggc
aatgttgttgtggggagggttattgggatccacaacaagaagtggaaggttgagttgagc
agtagaggagatgcttatctagggctgtcagccatcaaccttccggggacagttcaacgg
cggaaacaagaatcggatgagatgtccatgagggactttttcgacatcaacgatctagtt
gtatcggaagttcagaaagtcaaccgaaacggtacgattgcattacatacaagaaatgac
atgtatgggaagttgggccaaggtctcttggtgtttgcgccccactttctacttgagccc
ctcagaacgaggttcctccttcatggtaacatcaaggttattgtgggatgtaacggatac
atatgggttggaaaaacccgagaagatcccatggctttcatagagatagccagtcttgtt
tctaagataaagacaatggtgtcccagaatagatacataaacatggaagaattacttgaa
aaaaattcataa
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