Erysipelothrix inopinata: H9L01_03635
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Entry
H9L01_03635 CDS
T06822
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eio
Erysipelothrix inopinata
Pathway
eio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L01_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eio03019
]
H9L01_03635
Enzymes [BR:
eio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L01_03635
Messenger RNA biogenesis [BR:
eio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L01_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
eIF-3_zeta
AAA_22
Utp25_C
Flavi_DEAD
DUF3846
Motif
Other DBs
NCBI-ProteinID:
QNN61808
UniProt:
A0A7G9S1T3
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All DBs
Position
749275..750660
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AA seq
461 aa
AA seq
DB search
MKFEDLKINEELLRALKEQGYEAPTPIQEGAIPAVLDGRDVLGLAQTGTGKTAAFAVPTL
QILAQNPNQAKKRKIRALVLTPTRELGTQIYESYRDYGKHLPLTTTVIFGGVNQGKQVTA
LRAGVDVLVATPGRLIDLMNQGHVDISKIEIFILDEADRMLDMGFIHDIKRIMKIVPRKK
QTLLFSATMPKEIEEIVSELLYNPVKVSVTPVSSTVDTVKQTVQFVDQKNKINLLSRFLK
ENPGSSVLVFTRTKRGADRVVKDLQRRQISALAIHGNKSQNARQRALSSFEDYEIQVLVA
TDIASRGIDINELGYVVNYDMPDVPETYVHRIGRTGRAGHEGHSISYVNYQEIELLEDIE
KLIGKNIEVIDNPDFPLVDKTEKVNKSKANRHKKKQESIQTKSDRNDSKTKDNRHRKNRQ
KSEPWRKSEGKKSNNKKSGDKKPGNRTQKAKREANKRKRKG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagatttaaaaattaatgaggagctactaagagccttgaaggaacaaggt
tatgaagcccctacaccaatccaagaaggagcaattcctgctgttcttgatggtagagat
gtcttaggattagcacaaacgggtacggggaaaactgctgcctttgcagtcccaacgcta
cagatattggcacaaaatccaaaccaagcaaagaaacgtaaaattcgtgcattggtccta
acacctacgcgtgaacttggaacacaaatatacgaaagttatcgtgactatgggaagcat
ttaccgctgacaacgacagttatcttcggtggtgttaaccaagggaaacaagttaccgca
cttcgtgctggtgtggatgtattagttgctacaccgggacgcttgattgatttaatgaat
caaggtcatgtagatatatctaagattgaaatattcattttagatgaagccgatcgtatg
ttagatatgggattcattcatgatattaaaagaatcatgaaaatcgttcctcgtaaaaaa
caaacattgttattctctgcaacgatgccaaaggaaattgaagagatcgtaagcgaactt
ctttacaatcctgtgaaagtatccgtaactccggtatcatcaacagttgataccgtcaag
cagacagtacaatttgtagatcaaaaaaataaaataaacttgctctcaagattcttgaag
gagaatcctgggtcatcagtattagtgtttacacgaacaaaacgtggtgctgaccgtgtc
gtgaaagatttacaacgacgtcaaatatcagcacttgccattcatggaaataaatcgcag
aatgcacgccaacgcgccttgagtagttttgaggattatgaaattcaagtacttgtcgca
acagatatcgcatcgcgtggaattgacattaatgaattgggttatgttgtgaactatgac
atgccagatgttcctgaaacttatgttcaccgaatcggtcgtaccggtagagcagggcat
gaaggacactccatttcatatgttaactatcaagaaattgaattgttggaagatatcgag
aagttaattggtaaaaacatagaggttatcgacaatccagacttccctctagtagataaa
acggaaaaagtaaataagagtaaagcaaatcgccacaagaagaaacaagaatcaattcaa
acgaaatcggacagaaacgattcaaagacaaaagacaatcgccatagaaaaaatagacaa
aagagtgaaccatggcgtaagtcagaaggaaagaaatcaaataataaaaaatctggggat
aaaaaaccaggcaatcgtacacaaaaagcaaaacgagaagcgaataagagaaaacgcaag
gggtag
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