Erysipelothrix inopinata: H9L01_10140
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Entry
H9L01_10140 CDS
T06822
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
eio
Erysipelothrix inopinata
Pathway
eio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L01_10140 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eio03019
]
H9L01_10140 (rny)
Messenger RNA biogenesis [BR:
eio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L01_10140 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QNN60708
UniProt:
A0A7G9RYN3
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Position
complement(2122332..2123891)
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AA seq
519 aa
AA seq
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MNTTILLYSISTGIIVLVVTILAMVVINKNGLNRSKELSKNIIKEAEEKAETSMRQAQLE
AKTQAYEIKLNAEKELKNQQHEMQEYERKLDRREENLNNRDANLVIRDKEMLHKERELDS
KSLELTKMEQVLSERTEVQLQELERIASMPASEAKEELFDIVEKQMEQEVLAYIRDREEM
AHQRAEDVARNIISLAISRYAQEETTQRTSSVVTLPSEEMKGRIIGREGRNIRAFENATG
VDLLIDDTPEIITLSCFDPIRREIARMSLETLMVDGRIQPGRIEEVVDKSRKELYQVIQK
TGQDTLFDLGISKMDKEIVTVLGRLKYRYSYGQNALAHSIEVANLAGMMAAELGLNQKLA
KRAGLLHDIGKGLDFEMEGSHVELGVRLAKKHNEHPVVINAIASHHGDTEATSAIAVLVA
AADTLSAARPGARFESFENYIQRLEELEAIATTREGVQRAFAIQAGRELRVMVIPDAVSD
LETVKLAREIREEIEEKLTYPGQIKVNVIRELRAQEIAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacaattctactatattccatctcgaccggtattatagttttagtggtaacg
attcttgcgatggtcgttatcaacaaaaatggcttaaatcgttctaaagaattatcaaaa
aacatcattaaagaagcagaagaaaaagctgaaacttcaatgcgtcaagcacaactagaa
gctaaaacgcaagcctatgaaattaagctaaatgctgaaaaagaacttaagaatcaacaa
catgaaatgcaagaatatgaaagaaaattagatcgtcgtgaagaaaacttaaacaatcgt
gatgctaatcttgtaattcgtgataaagaaatgttgcataaagaacgagaactggattca
aagagtctcgaacttacaaagatggaacaagttttaagtgaacgtactgaagttcagtta
caagagcttgaaagaattgcttccatgccagcatctgaagctaaagaagaactttttgat
attgttgaaaaacaaatggaacaagaagtactcgcatatattcgtgatcgtgaagagatg
gctcatcaaagagctgaagacgtcgcaagaaacataatctctttggctatttcacgttat
gcacaagaagaaactacgcaaagaacatcttcagtggttacactaccaagtgaagaaatg
aagggacgtattattggtcgtgaaggtcgtaacattcgtgcatttgaaaatgctacgggt
gtggatctcttaattgatgatactccagaaataattacactttcatgttttgatccaatt
cgtcgtgaaatcgcacgaatgtcacttgaaacactcatggtggatggtcgcattcaacca
ggacgtattgaggaagttgtagataaatcgcgtaaagaactctatcaagtcattcaaaaa
acaggtcaagataccttatttgatttaggtatcagtaagatggataaagaaattgtaacg
gtattaggacgtttgaaatatcgttatagctatggtcaaaatgctttggcccacagtatt
gaggttgcaaaccttgcaggaatgatggcagctgaacttggcttaaatcaaaaacttgca
aaacgtgcaggtctcttacatgatattggaaaaggtttagattttgaaatggaaggatct
cacgttgaattgggagtgcgtcttgctaagaagcataacgaacatccggtggttatcaac
gcgattgcatctcaccatggtgatacagaagctacaagtgctattgctgtcttagttgct
gctgcagatacattaagtgctgcacgaccaggagcacgtttcgaaagctttgaaaactac
attcaaagactcgaagaacttgaagctatcgctacgactcgagaaggcgtacaacgtgca
ttcgcaatccaagcgggtcgtgaactccgtgttatggttattcccgatgcagtaagtgat
ctcgaaaccgttaagttagcacgagaaattcgtgaagaaatcgaagaaaaactaacttat
ccaggtcaaattaaagtgaatgttatccgtgaacttcgtgctcaggagattgcgaagtaa
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