Entamoeba invadens: EIN_027210
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Entry
EIN_027210 CDS
T04133
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eiv
Entamoeba invadens
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eiv03016
]
EIN_027210
Enzymes [BR:
eiv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EIN_027210
Transfer RNA biogenesis [BR:
eiv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EIN_027210
Prokaryotic type
tRNA splicing ligases
EIN_027210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-GeneID:
14889719
NCBI-ProteinID:
XP_004257593
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSKSTRYSKKNKGKKLQRAQEEKVQVDVKPKEIETFDFCGFKVPKKYEGKLERKPSELVI
KKDFVEGMKQDAKIYCNDDLLELLAGELCNDALNNFPSCVRQTANVATLPGIVGSMAMPD
AHSGYGFSIGGVAAMRLDEPEAVICPGGVGFDINCGVRLIRTNLTKRDIEPHKVRLADAL
FKKVPSGVGTKASIDFKEEDFDKLLTGGLEYMVEQGYAWEEDLKHCEEGGKIAGADPSLV
SKVAKSRGHQQVGTLGSGNHYLEVQTVDEIFDAEAAKAMGITEVGQVCVMVHCGSRGLGH
QVCQDYVAISMKKGHSNPVDKQLTGVPFNSEDGQKYFSAMNCCANFAFANRGMITYQIRE
AFENIMGIKAKKMGMGLVYDVCHNIAKVEEHEIEGKKVKCVIHRKGATRAFPPNHPVLPE
DYKMIGQPAIIGGSMGTCSYVLVGTQKGMENSFGSTCHGAGRRMSRVGAMKTVTSNEVIK
RMKEMGIELRITDPKLAAEEADEAYKDVTEVVETCQAAGISKIVMRLKPMIVVKG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagtacacgttactcgaagaagaacaagggaaaaaagttacagagagcacaa
gaggaaaaagtccaggtcgatgtgaagccgaaagaaattgagacattcgatttttgtggg
tttaaagtgccaaagaaatatgaaggaaagttggagaggaagccgagcgagttggtcatt
aaaaaggattttgtggaaggaatgaaacaagacgcaaaaatatactgtaatgacgacttg
cttgaactgcttgctggagaactttgcaatgatgccttgaacaacttcccttcatgcgtc
agacagacagcaaatgttgcaacacttccggggattgtgggatctatggcgatgccagac
gcacatagtggttatggattttcgattggaggcgttgctgctatgcgtcttgatgaacct
gaggcagtcatctgcccgggtggtgttggttttgatatcaactgtggtgtccgcctcatc
cgcaccaatttgaccaaaagagacattgaaccacacaaagttcggttggctgatgcgctt
tttaagaaagttccgagtggtgttggcactaaggcatcgattgattttaaggaagaagat
tttgacaagttgttaactggaggattggagtatatggtggagcaaggatatgcctgggaa
gaggatttaaagcactgtgaggaaggtgggaagattgcaggtgccgacccatcattagtt
tcgaaagtggcaaagagtagaggacatcaacaagttggaacacttgggagtggaaatcac
tacttggaggtgcagactgtcgatgagatttttgacgccgaagctgcaaaagcaatggga
attacagaagttgggcaagtctgtgttatggtccattgtgggagcagaggacttgggcat
caagtatgtcaagactatgttgcaatctcaatgaagaaggggcatagtaatcctgttgat
aagcaattgactggggttcctttcaacagtgaagatggacaaaaatatttcagcgcgatg
aactgctgcgccaactttgcatttgcgaatagaggaatgatcacatatcaaatcagagaa
gcgtttgagaacatcatgggtataaaagccaaaaaaatgggaatggggttagtgtatgat
gtgtgtcataacattgcaaaagtcgaggagcatgaaatcgagggcaaaaaagttaagtgc
gtcattcacagaaaaggagcaactcgagcctttccaccaaaccaccccgtccttcctgaa
gactacaagatgattgggcaaccagcaataatcggagggagtatgggaacatgttcatat
gttttggttggtacacagaaagggatggagaactcatttgggagtacgtgtcatggagct
gggagaagaatgagccgagttggtgcgatgaaaacagtcacatcaaacgaagtcatcaaa
agaatgaaagaaatgggcattgagttgagaatcaccgaccccaagttggctgccgaagag
gccgacgaggcttacaaagacgtcactgaagttgtggagacatgccaagccgcaggaatt
tcaaaaattgtcatgagacttaaaccaatgatagtcgttaaaggataa
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