Entamoeba invadens: EIN_053440
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Entry
EIN_053440 CDS
T04133
Name
(RefSeq) mRNA 3'-end-processing protein YTH1, putative
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
eiv
Entamoeba invadens
Pathway
eiv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EIN_053440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_053440
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_053440
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EIN_053440
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EIN_053440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_12
zf-CCCH_DUS3L
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
14892190
NCBI-ProteinID:
XP_004259870
LinkDB
All DBs
Position
Unknown
AA seq
160 aa
AA seq
DB search
MEKLTSLDHDIHMDIEKIIHETEQPKRDPKTIKPNEKTVVCSHWLRGSCKLGNNCGYLHE
YDLDKTPMCNHFEKYGKCDKPECPFRHEAPSNSPKCEWYIRGFCSRGKKCHNLHPKKLLC
PLYFMGFCPYGKQCKYSHPSPAPMRDNDRPKMPNKEQQQQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttaacatcgttagaccacgatatccacatggacatcgaaaaaatcattcac
gagacagaacaaccaaaacgtgacccaaaaacaatcaaaccaaacgaaaaaacagtcgtc
tgttcacattggctccgtggctcatgcaaacttggtaacaactgtgggtaccttcatgag
tacgacttggacaaaaccccaatgtgcaaccatttcgagaaatacggaaaatgtgataag
ccggagtgccctttccgtcatgaagctccaagtaacagtccaaagtgtgagtggtacatc
agagggttttgttcccgtgggaagaagtgtcacaacttacatccaaagaagttgttatgt
cctttatatttcatgggattttgtccatatggaaagcaatgcaaatactcacacccatcc
ccggctcctatgagagataatgatcgcccaaaaatgccaaataaagaacaacaacaacag
tga
DBGET
integrated database retrieval system
