Entamoeba invadens: EIN_054580
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Entry
EIN_054580 CDS
T04133
Name
(RefSeq) exosome complex exonuclease RRP46, putative
KO
K12590
exosome complex component RRP46
Organism
eiv
Entamoeba invadens
Pathway
eiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIN_054580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_054580
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EIN_054580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Rep_trans
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
14892404
NCBI-ProteinID:
XP_004259944
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MQVEVTQQTTAKESGKIRALSYQREVNTKSDGCYMFHQGKTCVIAGVNAPRNTLKSKEQP
NTAYVDVQFYEKVAAQQGKRKTELEEFVRSGVEWAVLCEKYPRGLINVCIQTVKDDGCVE
SVGMNATMTSLLYSGVDMKSIVVGMCVAGFKNANGQYEIVVDANDSREYQWRVFSAWDLT
TNAMAAMKMKGKCTDDQLKQSLEISSKNAAKMLRAIKTVIEKQYPL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggaggtaacacaacaaaccacagcaaaagaatcggggaagatcagagcgttg
tcgtaccaacgcgaggtcaacacaaagtccgacgggtgttacatgtttcaccaaggcaag
acgtgcgttatcgccggtgtaaacgcgccacgaaataccttgaaaagcaaagaacaacca
aacaccgcatacgttgatgtccagttctatgaaaaggtcgctgcacaacaaggaaaacgc
aaaaccgagttggaggaatttgtacggagtggtgtcgagtgggctgttttatgtgaaaaa
tacccccgagggttaatcaatgtttgtatccaaacggtgaaagacgatggttgcgtcgag
tctgttgggatgaacgcgacaatgacgtctttattatatagtggtgtcgacatgaagtcc
attgtagttgggatgtgtgtagctgggttcaaaaatgcaaatgggcaatacgaaatcgta
gtggatgcaaacgactccagagagtatcagtggagggttttcagtgcgtgggacttgacc
accaatgcgatggctgcgatgaaaatgaaaggaaagtgcactgacgaccaacttaagcag
agtcttgaaatctcatcgaaaaacgccgctaaaatgctgcgagccatcaagaccgtcatc
gagaaacagtatcctctctaa
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integrated database retrieval system
