Entamoeba invadens: EIN_064310
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Entry
EIN_064310 CDS
T04133
Name
(RefSeq) lsm1, putative
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
eiv
Entamoeba invadens
Pathway
eiv03018
RNA degradation
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_064310
09123 Folding, sorting and degradation
03018 RNA degradation
EIN_064310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_064310
03041 Spliceosome [BR:
eiv03041
]
EIN_064310
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EIN_064310
mRNA degradation factors
5'-3' decay
Lsm complex
EIN_064310
Spliceosome [BR:
eiv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EIN_064310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
14883224
NCBI-ProteinID:
XP_004183562
UniProt:
A0A0A1TV87
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MSLIKQYQNKLVEAVTNDGRIFIGTLIGYDNPSNIVLRECIERVFSKSGVSVIPCGLLVL
RGDEIILIGALDEQKDSSVDWPSVIANPLAHALI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcattaaacaataccaaaacaaactggttgaggcagttacaaacgatgggagg
atttttattggtacattgatcggttacgacaacccctcaaacatcgtcttgcgcgagtgt
atcgagcgtgttttttcaaaatctggtgtttctgtcattccctgtggacttctagtactt
cgtggtgatgagattattctaattggtgctctcgatgaacagaaagactcctccgttgat
tggccttctgtgattgcaaaccctcttgctcatgctttgatttga
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