KEGG   Entamoeba invadens: EIN_064310
Entry
EIN_064310        CDS       T04133                                 
Name
(RefSeq) lsm1, putative
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
eiv  Entamoeba invadens
Pathway
eiv03018  RNA degradation
eiv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eiv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EIN_064310
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EIN_064310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eiv03019]
    EIN_064310
   03041 Spliceosome [BR:eiv03041]
    EIN_064310
Messenger RNA biogenesis [BR:eiv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EIN_064310
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EIN_064310
Spliceosome [BR:eiv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EIN_064310
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 14883224
NCBI-ProteinID: XP_004183562
UniProt: A0A0A1TV87
LinkDB
Position
Unknown
AA seq 94 aa
MSLIKQYQNKLVEAVTNDGRIFIGTLIGYDNPSNIVLRECIERVFSKSGVSVIPCGLLVL
RGDEIILIGALDEQKDSSVDWPSVIANPLAHALI
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtccctcattaaacaataccaaaacaaactggttgaggcagttacaaacgatgggagg
atttttattggtacattgatcggttacgacaacccctcaaacatcgtcttgcgcgagtgt
atcgagcgtgttttttcaaaatctggtgtttctgtcattccctgtggacttctagtactt
cgtggtgatgagattattctaattggtgctctcgatgaacagaaagactcctccgttgat
tggccttctgtgattgcaaaccctcttgctcatgctttgatttga

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