Entamoeba invadens: EIN_066010
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Entry
EIN_066010 CDS
T04133
Name
(RefSeq) pre-mRNA-splicing factor SYF1, putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eiv
Entamoeba invadens
Pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_066010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_066010
03041 Spliceosome [BR:
eiv03041
]
EIN_066010
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EIN_066010
Spliceosome [BR:
eiv03041
]
Complex B
Other components
Prp19-related factors
EIN_066010
Complex C
EIN_066010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
TPR_14
ARM_TT21
Suf
NRDE-2
FlbT
DUF896
Motif
Other DBs
NCBI-GeneID:
14883195
NCBI-ProteinID:
XP_004183662
UniProt:
A0A0A1TVE4
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MESGVLDKFEQDVQQNHQSFKSWWGYIDLFDDTHFQEKRMIYVRALKELPMSYKLWHTFL
LSSERDARGTPLESPTRLELTQRYEESVVYMSKMPTIWKNYIEWLYTNCEITQMRRVFDR
ALRSLPSGQHKILWGVIMKYIVSLDSPKLFNNMVTRHLKYDRSLSVEYVKVCIEKGSLYL
PTAASILIKHLGSTWRVRREEYELLVQVIENGGADDVVDVESVLRHGINEYINDSGRLWV
GLARWHIRQGRVESGIVVLEQAMEEVVSVRDLYIVRECYEAVISSLSQNSNDTDKDDNQR
IVHERGETVLAHVMMQVNGVLLRKNPEDVSEWISRSHMYIEQGDVVSAVDTLLEGIKTVK
EGINGTKSDIYSELISWYSRAGKYEVVNSLYNKAKTESLSQEEEGKLSELIVKDSVKRGD
VTKALEYVEEATLKSSRIKREGSVWRAYLAVEKTRKGLLGIVSVYEKMIEIGCITAREVL
EYIDLITKEGKALGIEDTVWSIYERSILKFTYPIAGKLWMKYFDDFVSKYGETKVERCRE
LYESALLKCPAEFKLEISKKAVAFESTKNSSYRVIELYKKIVKEVNPESLCETYLLYGQA
VNELEGSQSAQKVYEEGVLKVGRREEWRLYLECAKCLIENEDVDNARDMFVKGAKRCSVK
EHPEFWNTWNDFEEQFGNELTYKDLLVAKADVMGYFGEN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagtgcttgacaagtttgagcaagacgtccagcagaatcatcagtcgttc
aaatcgtggtgggggtatatagatttatttgatgacacgcatttccaagagaagcggatg
atatacgttcgtgccttgaaagaacttcccatgagttacaaattatggcacacctttctc
ctatcctccgagcgtgatgcacggggcacccctcttgaaagtccgactcgtctagaatta
actcaaagatacgaggagagtgtagtttacatgtcgaagatgccaacaatctggaagaat
tacattgagtggttatacaccaattgtgagatcactcaaatgcggcgagtctttgatcga
gcccttcggtcattaccaagtggtcagcataagattctatggggtgttataatgaagtac
attgtctctttagattccccaaagctctttaataatatggttacccgtcatctgaaatat
gaccggagcttgtcggttgaatatgtcaaagtttgtatagaaaagggatctctgtatttg
ccgacagcggcttcgatattaatcaaacacttaggaagcacttggagagtccgaagagaa
gaatatgaattgttagtccaagtgattgagaatggcggagctgatgacgttgttgatgtt
gaaagtgttttacgccatggcatcaacgaatatatcaatgactcgggaagactgtgggtt
gggcttgcacgatggcacatccggcaagggcgagttgagagtggcatagttgtattagaa
caagcgatggaagaagtagtgagtgtgcgagatctttatatagtacgtgaatgttatgaa
gcggtgatatcgagtctctcacaaaattcgaatgacaccgacaaagatgataatcaacgt
atcgtacacgagagaggggagactgttttggcacatgtgatgatgcaagtcaatggagtt
ttattaaggaaaaatcctgaagatgttagtgaatggatatcgaggagtcatatgtacatt
gaacaaggcgatgttgtcagtgcagtggatacattattagaaggaattaaaacagtgaaa
gaaggaattaatggcacaaagagtgacatatatagtgaactaatttcatggtatagtagg
gctggtaaatacgaagtagtcaattctttatataataaagctaaaacggagtccctgagt
caagaagaagaagggaagttatcagaattgatagtgaaagactcagtgaagagaggagat
gtgacaaaagcacttgaatacgttgaagaagcgacgttgaaaagtagtcgtataaaacgg
gaagggagtgtgtggagagcatacctcgctgttgaaaaaacacggaaaggacttttgggg
atagtttcagtatatgagaagatgatagaaattgggtgtattacagctagagaagtcttg
gaatatattgaccttattactaaagaaggtaaagcgttgggaattgaagacactgtgtgg
agcatttacgagcgaagtatcttgaaattcacatatccgattgccgggaaattgtggatg
aaatactttgacgactttgtatcgaaatatggagagacgaaagtggagaggtgtcgtgag
ttgtatgagtcggctcttttgaaatgtccggccgagttcaagttagaaattagtaagaag
gccgttgcatttgaatcgacgaaaaactcgagttatcgtgtcatagagttatataagaaa
atagtgaaagaagtgaatcccgagtcgttgtgtgaaacatatcttttatatggacaagca
gtgaatgaattagaagggagtcaaagtgcacaaaaagtgtatgaagaaggagttttaaaa
gttggaaggagagaggagtggagactgtacttggaatgtgcaaagtgtttgattgaaaat
gaagacgttgacaatgcaagagatatgtttgtgaaaggggcgaagaggtgtagtgtgaaa
gaacatccggaattctggaatacttggaatgacttcgaggaacaatttggaaatgaactc
acgtataaagaccttcttgttgcaaaggcagatgtgatgggatacttcggtgaaaattga
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