Entamoeba invadens: EIN_094730
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Entry
EIN_094730 CDS
T04133
Name
(RefSeq) splicing factor 3B subunit, putative
KO
K12830
splicing factor 3B subunit 3
Organism
eiv
Entamoeba invadens
Pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_094730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_094730
03041 Spliceosome [BR:
eiv03041
]
EIN_094730
03036 Chromosome and associated proteins [BR:
eiv03036
]
EIN_094730
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EIN_094730
Spliceosome [BR:
eiv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
EIN_094730
Complex B
EIN_094730
Complex C
U2 SnRNP specific factors
EIN_094730
Chromosome and associated proteins [BR:
eiv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
EIN_094730
TFTC complex
EIN_094730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
WD40_WDHD1_1st
Tobravirus_2B
Motif
Other DBs
NCBI-GeneID:
14886364
NCBI-ProteinID:
XP_004254017
UniProt:
A0A0A1U5Y7
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MSYVSLTLEENSTVTSSCFGDFSGTNSIELVLIRAQTLLQIYRISEDSIELLTQTPTFSL
IRAISTIKIGNEGKDYILLGSDSGSVCLLSYDAHTNSLKTIHNEIFGKSGIRRVVPGQYI
VADPSGRAVMVSAIEKQKFVYVMNRNSNGEVTISSPLEANKSNSICFDLAALDVGFDNPM
FAAIEVDYNEQYLPHIKDRIVKKFIVLYEMDLGLNHVVRKSAEPINETANHIIPIPTLKE
DVHLGMFICSENRISWYNPGHPIQSIEIPKMDEETTQSTLIVSHVVLRMKTGHFILVQSE
YGDLFRIHFQTEDNGDITDLKLTYFDTIQSTLGMIISKKGHIFTASEFNDSHLYQITSLG
DEESEEHEGTQQEVEMKEETNGMVQIPFFDAKKDQTPLKITRYDSVRHLDEISNFKSNAP
ITGMSVCYGDDKKTANKYILYTGRGPSSCVQVLKHQMKTLEVAEITLPAIAMGVYPLQRS
KDVSEYLVVPFANATSILKISEDEVKETDETPVILSSYSVRIGMMPDGTFVQVLKEKIVV
YTSKIKEVSVVGDIVCAAIVESFVVVGVSKGDDNVIMLFKYEDGGLHEIESKGSFGKIRS
VTIENKEVPKFCAVACEDGGIRILTLFNTETTKALTRVSVISLESAINDVKFGVLNSKQI
IVAGLDDGKLAWCFFDSNSGEIEETNFEFVGVQNVNLGRVYTTSESGEEWMVGYNGNGIL
LSTSNGQIKSTPLDQPNIYGVEGFKASFVDNPIALVSGNILKILVFENTTSSLSGVKVPL
CMTPRKIVESETVEDTFVLCADNFSKYANDEIIRGDDGEWVSSIYRMDKEATKIELVTKF
PQNVYALCGTLLTVSDSIYLVVGLAEKYTSRPIKFTNSSIAVYKVNVDNIQYLYTTQTEY
PVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAELRQLASEISDIHVINNKIQLVGISD
GISFVRFNQTKQEFDIYADTLPRWTVKSVALTPTSYIGSDKFGQIFVEGLDKETEENASN
IFSSILSGEKTIYNGAKYKAVSLNEFYLGDIATGFVNCCVRIGAPQIFIVSHLLGGISAL
IPLNGFGEIEFFEQLEMHMRVRHQNVNGRDHIAYRSSVVPVKGIFDGDLCELFEKLTEEE
KKEIAGEMEREVGEIVKKLHDLRNMRAF
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgtctcattaacactcgaagagaacagcacagtgacctcgtcgtgttttggc
gatttttcaggtacaaattcaattgagttggttttaattcgagcacagaccctccttcaa
atctatcgaattagcgaagatagcatcgagttactgacacaaacaccaacgttttcatta
attcgagcaattagcactataaaaatagggaacgagggaaaagactacattttgcttgga
agtgactcggggtcggtttgtttgctctcgtatgacgcccacacaaatagtctgaagaca
attcataatgaaatatttgggaaaagtggtatccgtcgcgttgtaccggggcaatatata
gtagcggacccttcggggagagcggtgatggtctctgcaattgagaagcaaaagtttgtg
tatgtgatgaatagaaattcgaatggcgaagtcactatatcgtcccccctcgaggcaaat
aagagtaactcaatttgctttgacttagctgctttggatgttgggtttgacaacccaatg
tttgctgccattgaagttgattacaatgaacagtatttacctcatattaaagatcgcatc
gtgaagaaattcattgtgttgtacgagatggatttgggattaaatcatgtggtgagaaaa
tcagcagagcccatcaacgagacagcgaaccacatcatccctattccaacactgaaagaa
gacgtccatcttgggatgttcatatgtagcgaaaatagaatcagttggtacaatccagga
cacccaattcaaagcatcgaaataccaaaaatggacgaagaaacgacgcaaagcacttta
attgtatcacatgtggtcttgagaatgaaaacaggacatttcatattggttcaaagcgag
tatggtgatttgtttcgaatacactttcaaacggaagacaatggagatataacggatttg
aaacttacatactttgacactatacaaagtactctagggatgattatatcaaagaaagga
cacatctttacagcaagtgagttcaacgattcacatttgtatcaaataacttctttgggg
gatgaagagagcgaagaacatgaaggcactcaacaggaagtcgaaatgaaagaagaaacg
aatgggatggtgcaaataccttttttcgatgcaaagaaagaccaaacaccactaaaaatc
acgcgatatgattcggtgaggcacttggacgagatatcaaattttaagtcgaacgcaccg
atcacagggatgtctgtgtgttatggcgatgacaagaaaacggcgaacaagtatatactg
tacacgggaagaggtccctcaagttgtgtgcaagtcctcaaacaccaaatgaaaacacta
gaagtggctgagatcacattaccagccattgccatgggcgtctatccactccaaaggagt
aaagatgtctcagagtatttggtagtaccttttgcaaatgcgacgagtattttaaagatc
agtgaggacgaagttaaagagactgacgagacaccagtcatattaagcagctactctgtg
agaattggaatgatgccagatggtacatttgtgcaggtgttgaaagagaagattgttgta
tatacaagtaagatcaaagaagtatccgttgttggagatatcgtgtgtgctgctattgtg
gaatcttttgttgtggttggggtgtcgaaaggtgacgataacgttatcatgttattcaag
tacgaggatggggggctacacgaaatcgagtctaaagggtcgtttgggaagatccgaagt
gtcaccattgaaaacaaggaagttccaaagttctgcgcagttgcgtgtgaggatgggggg
attcgtatactcacactcttcaacacagaaacaacaaaagcactgacacgtgtttcggtc
atttcattggaatctgcaattaacgacgtcaaatttggggtattaaattcaaagcaaata
atcgttgctgggcttgatgatggtaaactcgcgtggtgctttttcgactccaactcaggt
gaaattgaagaaaccaactttgagtttgttggtgttcaaaacgttaatttaggaagagtc
tacacaacaagtgagtctggtgaagagtggatggttgggtacaatggtaatggtatctta
ctctcaacgtcaaatggccaaatcaaaagtactccattggatcaacccaatatttatggt
gtggaggggtttaaagcaagttttgtggacaacccaattgctttggtttctggtaatatt
ttgaagattcttgtctttgaaaacacgacttcctcgttgagtggtgtgaaagtgccatta
tgcatgactccaaggaaaattgtggagagtgaaacagttgaagacacttttgttttatgt
gcagataatttctcgaaatatgcaaacgatgagatcattcgaggtgatgatggggagtgg
gtgtcttcgatataccgcatggacaaagaagcaacaaaaatagaacttgttacaaaattt
ccacaaaatgtgtacgcattgtgcgggacgttactcaccgtttccgactcaatttatttg
gtggttggccttgctgaaaaatacacaagtcgacccattaaattcacaaatagtagcatc
gccgtttataaagttaatgtagacaacattcagtatctctataccacacagacagaatac
ccagttcgttcaatggcagtgtatggcggtcgtgtactctgtggaattaacagacaactc
cgaatgtatgaaattgggaagaaacagttgttgagaaaggctgagttacgacaactcgcc
tcggagatatcggacatccatgtgatcaacaataagatacaattggtggggatcagcgac
ggtatttcgtttgttcgatttaatcagacaaaacaggaatttgatatatacgcagacacg
ttgccgaggtggactgtaaaaagtgttgcactgacaccaacaagctatatcgggtctgac
aagtttggacagatctttgttgaaggacttgataaagaaacagaagagaatgcgtcaaat
atcttttcgtcgattttgagcggagaaaagacgatatataatggtgccaagtataaagca
gtcagtcttaatgagttctatttgggagacatcgcgactggctttgtgaattgttgtgtc
agaataggggcaccacaaatcttcatagtcagccacttattgggtggaatttcagcgctc
atcccactcaacggatttggcgaaatcgagttcttcgaacagcttgaaatgcatatgaga
gtaagacaccaaaatgtgaatggacgagaccacattgcatacagaagttccgttgttcca
gtgaaaggaattttcgacggggatttgtgcgagttgtttgagaagttgaccgaagaagaa
aaaaaagaaattgcaggggagatggagcgagaagttggagagattgtcaagaaacttcat
gacttgagaaacatgagagcattttga
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integrated database retrieval system
