KEGG   Entamoeba invadens: EIN_098650
Entry
EIN_098650        CDS       T04133                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
eiv  Entamoeba invadens
Pathway
eiv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eiv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EIN_098650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eiv03041]
    EIN_098650
Spliceosome [BR:eiv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    EIN_098650
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF4 PRP4 Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd eIF2A Beta-prop_Vps41 Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF12 PQQ WDR54 B-prop_COPA_B_2nd Beta-prop_NOL10_N Beta-prop_NWD2_C DEC1 Beta-prop_ELP1_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 14886328
NCBI-ProteinID: XP_004254309
UniProt: A0A0A1U495
LinkDB
Position
Unknown
AA seq 441 aa
MEDIAKSDEYAEKIRKLEEKWKFRKIPLPTDDRLIMLRLREIGEPIKLFSESFEDRRERL
RNSLTKVGSDQGFPQCAFQVKKDEERKTELHYTEGCEELLEVRRWILVDSILRASNRHTE
LKQKYCLDNPKEQLGVDFGHVNNKYKEKYRVVSSFVADDLRVLKCDARGSDVITGGGDGH
VRLFDVENGQLKKDFATPSQIYSLQYSPDIESPIEVVSGGQDGCIRIFMKNTGEPLILKA
HEDRVNSLNFHPSGRFLLSASHDSLIKMWDLEIGACVLTQTGHVKPVRSVVWQQDGGVCV
SGGDDKYISMWDIRSGKRVLKFEGHSGSVTSLDWHCDGMVLASSSEDNTVKLWDVRMKKC
GFTIPAHNNIVMATKFKSDGNYLLTSCFDHSVKLFDVRNWEWKEVERFEAHSKAVTDIAW
INNGFVSCGLDKTLKVYLNTD
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggaggatattgctaaatctgacgagtacgcagaaaagattcgaaagctagaagagaaa
tggaagttccgtaaaattccactcccaacagatgatcggttgattatgttgcgtttaaga
gaaattggggaacccatcaaattgttttcggagagttttgaagaccgtcgcgagagactt
agaaattcacttacgaaggttggctccgaccaggggttcccacagtgcgcctttcaggtc
aaaaaagatgaggaaaggaaaactgaacttcattacaccgagggatgtgaagaacttttg
gaggtgaggcggtggattttagtcgactcaatactcagggcatccaatagacacaccgaa
ttgaaacaaaagtattgtttggacaatccaaaagaacaactaggggtggatttcggacat
gtgaacaataaatacaaagaaaagtatcgagttgtctcgtcatttgtagcagatgatctt
cgtgttttaaaatgcgatgcgaggggaagtgatgttattacaggagggggtgacggtcat
gttagactttttgatgtggaaaacggacaacttaaaaaagactttgccactccatcacaa
atatattcgttgcaatacagccctgatattgagtctccgattgaagttgtgtctggagga
caagatgggtgcattagaattttcatgaaaaacacgggtgaaccgttgatactcaaagca
catgaagaccgagtgaactctctgaattttcatccctcaggaagatttttactgagcgca
tcacacgactcattaatcaaaatgtgggacttagaaattggtgcatgtgtgctgacacag
acaggtcatgtgaaaccagtgagaagcgtcgtttggcaacaagatggtggggtatgtgtg
agtggtggagatgacaagtatatcagtatgtgggatatacggagtgggaaacgtgttttg
aaatttgaaggacactcaggcagcgtcacatcgttagattggcactgtgatggaatggtt
ttagcatcctcatctgaggacaacactgttaaactatgggatgtgagaatgaaaaagtgt
gggttcacaataccggcacacaacaatattgtgatggccacaaaattcaaaagtgatggg
aattatttgttgacatcatgttttgaccactctgtcaaattgtttgatgtgaggaactgg
gaatggaaagaagtagaaaggtttgaagcccattccaaagcagtcacagatatcgcgtgg
atcaacaatggttttgtttcgtgtggacttgacaaaacactgaaagtttatttgaatact
gattga

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