Entamoeba invadens: EIN_161940
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Entry
EIN_161940 CDS
T04133
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03030
DNA replication
eiv03410
Base excision repair
eiv03420
Nucleotide excision repair
eiv03430
Mismatch repair
eiv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIN_161940
03410 Base excision repair
EIN_161940
03420 Nucleotide excision repair
EIN_161940
03430 Mismatch repair
EIN_161940
03440 Homologous recombination
EIN_161940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eiv03032
]
EIN_161940
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_161940
Enzymes [BR:
eiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIN_161940
DNA replication proteins [BR:
eiv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
EIN_161940
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
EIN_161940
MMR (mismatch excision repair)
DNA polymerase delta complex
EIN_161940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
divDNApol
DZR_2
Motif
Other DBs
NCBI-GeneID:
14885557
NCBI-ProteinID:
XP_004185906
UniProt:
A0A0A1U4D5
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MKRQAVNNQKNYVSFPRDKRLDSIKKFPSKIYNSQTDSIEFLQFDIEYVTRLVEKSERVR
PDPQSDGFEEPVLYMYGCTSSGDSVLARVTGFKPYFYISVDHLYTESELNDLKVSMNKAL
HVDVQGNTDDDQYVLSVEGVTQYHSIMNYTAYKDDFFVKITLRIPKYVPMLRHLLNDTTR
VSNRQFQTFEADILFVLRYMIDAGIVGCSWVKAPPKRYVIIPDSNRISRCQLEISLDYRD
LVNLGFTGEYTRMAPLRICSFDIECVSAKGTFPVPEKDSVIQIANYVVELGSEKVINKNV
FVLKGCTPIPGATIFGFDTEEELLKGWSDFVNDIDVDIFTGYNIMNFDFNYLITRANTLK
VKDFGRFSRLRKSNVTMKQGTFQSKAVGTRESFELIGLEGRIPFDMFQVIQRDYKLRSYT
LNFVSSNFLGDQKEDVHYSDIADLHNGSPDDRNRIAVYCLKDTYLPIRLIKKLMSLVNGV
EMCRVTGIPLSYLLPRGQQVKVITQLYRHANDKHFLIPFYQRPSGEGDKYVGATVINPIK
GFYRDPISVLDFSSLYPSIMISHNLCYSTLIEGVKTRVDVKNIEDLKTSGEQSDKNAYDQ
IVKKCLEKHLSLDDVELSPNGDLFVRSNKQKGILPEILENLLAARKQAKKDMAAEKDEFK
IKVLNGRQLALKISANSVYGFTGAQVGKLPCMQIASSVTSYGRTMIELTKNTVETHYSIK
NGFAYDAKVVYGDTDSVMVKFGTSDLKEAIRVGKEAAEYVTSKFPKPINLEFEKVFWPYL
LISKKRYAGVFWCNAEKYDHLDTKGIETVRRDNCMLVKYVIERCLDLILLDKEKDNITRA
VQFVKDTIRELLQNKLDLSMLIISKTLSKESYAAKQAHVELANRMRERDKSVLINLGDRI
PYVIVKSTKEARAYEKAEDPMYVLQKDIPIDFEYYIENQMRKPLTRIFRPILGDKVNELF
EGEHTRFVVQTTPVEASPLGKFIVKQKRCVECRAVVKGSGVLCENCKQKTGEILVKKMKD
VRESELEYNAIMTQCQDCMISHHRDIICGNRDCPIFYMRTKVEKAIKQKRAMIEDFDW
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcaagcagtcaacaatcaaaagaattatgtgagttttccccgagacaagcgt
ttagattccattaaaaaatttccaagtaaaatatacaattcccaaaccgattccattgag
tttttacaatttgatatcgaatacgtcactcgcttagttgagaaatccgagcgagtacgt
cccgacccacagagtgatggatttgaagagcctgtgttatacatgtatgggtgcacctct
tctggtgattctgtattagcccgagtcactgggttcaagccgtatttttacatatccgtc
gaccatttatacactgagtccgaattgaatgacctcaaagtctcaatgaataaagcgctc
cacgtggacgtccaaggaaataccgatgatgatcaatatgtcttatcagtcgaaggtgtt
acccaatatcactccatcatgaattacacagcgtacaaggacgatttcttcgttaaaata
acactccgtattcctaagtacgttcccatgcttcgacatctcctcaacgacaccactcgc
gtttcaaatcgccaattccagaccttcgaggcggacattctctttgtcctgaggtacatg
atagatgctgggatagtcgggtgtagttgggttaaagctcctccaaaaaggtacgttata
attccggactccaatcgaatttcgagatgtcaattagagatctccttagattatcgagat
ctggtcaatctaggctttactggggagtacactcgtatggcgccgttacgcatctgttcc
tttgatatcgagtgtgtgtctgcgaaggggacttttccagtgcctgagaaagattccgtg
attcaaattgccaattacgttgttgagcttgggagtgagaaagtcattaataagaacgtc
tttgtactaaaggggtgtacacccataccaggcgcgacgatctttggatttgatactgag
gaggaattattgaaagggtggtctgactttgtgaatgatattgacgtcgacatcttcact
gggtataatatcatgaactttgattttaactatttaattacacgggcgaacacgttgaag
gtcaaggactttggccgattctctcgacttcgcaaatcgaatgtgacgatgaaacaaggg
accttccaatcgaaggctgtagggacacgagagtcctttgaattgattggattagaaggg
agaataccttttgatatgttccaagtgattcaacgggactataaattgaggagctacaca
ctcaattttgtctcgtcgaatttcttaggcgatcagaaggaagatgtgcactatagtgat
atagcagatctccataatggaagtccagatgacagaaatcgaattgcagtgtattgcttg
aaagatacatatctgccgattcgactgattaagaagttgatgagtcttgtcaatggagta
gaaatgtgtagagtcactggaatacctttgagttacttacttcctcgtggacaacaagtg
aaagtgataactcagttgtatcgccacgcaaatgataaacactttttaatacccttttac
caacgccccagtggggagggggacaaatacgttggtgcgactgttattaacccaattaaa
gggttctatagagacccgatctccgtgctggacttctccagtctgtacccgtccattatg
atctcacacaatttgtgctactcgacactaatcgaaggcgtgaagactcgcgttgatgtg
aagaatatagaagatctgaagacctcgggggagcagagtgataagaacgcatatgaccaa
atcgtcaagaaatgccttgaaaagcatttaagtctggacgacgtcgaattgtcaccaaat
ggagacttgtttgtgagaagcaacaaacagaagggcattctcccggagattctagagaat
ctgctggctgcgcgaaagcaggcgaagaaggatatggcggcggagaaggacgagttcaag
attaaagtgctgaatgggcggcaactggcgttaaagatatcggcaaattcggtgtatggg
tttactggggcgcaagtcggtaaacttccatgtatgcagatagcttcatccgtgacgtcg
tatggacgtacgatgatcgagttaacaaaaaacaccgttgagacgcattattcgatcaag
aatgggtttgcgtatgatgcgaaagtggtgtatggagacacggactcggtgatggtgaag
tttgggacgtcagacttgaaagaggcgattcgtgttgggaaggaggctgcggagtatgtc
acgtcgaagtttccgaagccgatcaatttagagtttgagaaggtcttttggccgtatttg
ttaatctcgaagaagaggtatgctggagtcttctggtgtaatgcggagaaatatgatcat
ttagatacgaaagggatagagacggtacgccgcgataactgtatgttagtgaagtatgtc
attgagaggtgtttagacttaattctgcttgataaggagaaggacaatatcactcgagca
gtacaatttgtgaaggatacgatccgggagttattacaaaacaaattggacttgtcgatg
ttgatcatttcaaagacgttatcaaaagagtcgtatgctgcgaagcaagcgcatgtggaa
ttagcgaatcggatgagggaaagagataagagtgtcttaattaatttaggagatcgaatt
ccatatgtcatagtgaagtccacaaaagaggcgcgagcatatgagaaggcggaagatcca
atgtacgtgttacagaaggacattccgattgattttgaatattatattgaaaatcaaatg
aggaaaccattaacaaggatcttcagaccaattcttggagataaagtcaacgaattgttt
gaaggagaacacaccagatttgtcgtacaaacaactcccgtcgaagcgtcaccactcggg
aaattcattgtgaaacaaaagagatgcgtcgagtgcagagcagttgtcaaaggaagtggc
gtcttgtgcgaaaattgtaaacagaagacgggagagatattagtaaagaagatgaaggac
gtcagagaaagcgaattggagtataacgctattatgacccaatgccaggactgtatgatc
tcccaccacagagatatcatttgcgggaaccgtgactgcccgattttctatatgagaaca
aaagtggaaaaggctattaaacagaagagagcgatgattgaagactttgactggtaa
DBGET
integrated database retrieval system
