Entamoeba invadens: EIN_173870
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Entry
EIN_173870 CDS
T04133
Name
(RefSeq) ATP-dependent RNA helicase DHX8, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_173870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eiv03041
]
EIN_173870
03009 Ribosome biogenesis [BR:
eiv03009
]
EIN_173870
Enzymes [BR:
eiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EIN_173870
Spliceosome [BR:
eiv03041
]
Complex A
U2 snRNP components
U2 related factors
EIN_173870
Complex B
EIN_173870
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EIN_173870
Ribosome biogenesis [BR:
eiv03009
]
Eukaryotic type
90S particles
Helicases
EIN_173870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
nSTAND3
ResIII
AAA_22
TsaE
T2SSE
SRP54
Motif
Other DBs
NCBI-GeneID:
14883609
NCBI-ProteinID:
XP_004184058
UniProt:
A0A0A1TW27
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MKRDKGPTKRVNLENAELHETNPFTNRPFSNGYYVLQEKIKKLPVIKYEEEIVKTLRENK
TLILEGATGSGKTTQIPKFCLDLDICKGKGVCCTQPRRVAAISVSTRVAKEMDVQLGEEV
GYAVRFDDCRGPQTRLTYMTDGMLLRELMSDPELTRYGVVLLDEAHERTVATDLLFGILK
GLVQKRDDLKIVVMSATLEASKFREYFSGSPVMTVEGRTYPVEINYSAFPENDYFEATFT
TVKKIDGEPEGDVLIFLTGEDEIEEMCDRINSFSSKSKMVALPLYSALPQNEQQKVFDEV
KGRKVVVATNIAETSITIDGIVYVIDCGYVKQKVYLPSTRVETLQVTPISQAAAQQRAGR
AGRTRPGKCFRLYTEKGFEESLGKQTVPEMLRTSLASVILHMKKIGIKDILHFDYLDAPS
PQVMVRALEQLYYLNALDSKTDLTDVGIQIAELPIEPQMAVALLSSIDYKVVDEVSTIIA
LLNVPSVFYRPKDQKEKEKADAMKAYFNNAESDHITLLNAFNQWVENEKDPNWAWESYVN
QRALKQASSIKDQLLGILYRNGVNSEQGVKDIRERNINIRKALCKGFFMQSAHIIKGKYQ
IVSENRIVLLHPSSCVGKREWIVYNEYVMTKNEYVRTVSGIEPEWLFEASPQYFEKLETF
KQSETTRALCRIKKAMSSK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggacaaaggaccaacaaagcgcgtaaatttggagaacgcagagctccacgaa
acgaacccgttcacaaaccgtccgttctccaatgggtactacgtgttacaagaaaaaatc
aagaagcttcctgttattaagtacgaggaagaaattgtcaaaacactacgagagaacaaa
accctaattcttgaaggcgcgactggctcgggtaaaacaactcaaatccccaaattttgt
ttggaccttgacatctgtaaagggaaaggtgtatgctgcacgcagccaagaagagtcgcc
gctatttctgtctccacacgagttgcgaaagaaatggacgtacaacttggagaggaagtt
gggtacgcggttaggtttgacgactgcagaggtccacaaacgagactgacatatatgaca
gatggaatgttgttacgagagttaatgagtgatcccgagctgacgagatatggtgttgtg
ttactagatgaagcgcacgaacgtactgtcgcgacagaccttcttttcggtatattaaaa
gggctggtgcaaaagcgggacgatctaaaaatagttgtcatgtcggctaccttagaggct
tccaagttcagagaatacttttctggatctccagtgatgaccgttgagggtcgaacgtat
ccagtcgagattaattactctgcatttcccgagaacgattactttgaagcgacgtttacc
actgtgaaaaaaatcgatggagagcctgaaggcgacgttctaatctttttaacaggtgaa
gatgaaattgaagaaatgtgtgatagaatcaacagtttcagttcaaagagtaaaatggtt
gcattgccgttatactctgcgttgccacaaaatgaacaacaaaaagtctttgatgaagtg
aaagggaggaaggtggttgtagccaccaacattgctgagacgtccattacaattgatggc
atcgtgtatgtgatcgactgtggatatgtcaaacaaaaggtgtacctcccatctacacga
gtcgagacgttgcaagtgaccccaatatcacaagccgctgcacaacaacgtgctggtcgt
gcggggcgtactcgacccggcaaatgtttccgattgtatacagaaaaggggtttgaagag
agtttaggcaagcagactgtacccgagatgttacgaacaagtcttgcgtctgtgatatta
cacatgaaaaagataggtattaaagatatcctccacttcgattatttggacgccccatca
ccacaagtgatggtgagagctttggagcaactgtattacttaaatgcgttagactcgaaa
acagacttaactgatgttggcattcagatcgccgaattgccaatcgaaccacagatggcc
gttgctctgttgtcttcaattgactacaaagtagtcgacgaggtctcgactatcatcgcg
ctgttaaacgtccccagcgtcttttatcgaccgaaagaccagaaagaaaaagaaaaagcc
gacgcgatgaaggcgtacttcaacaatgctgagtcggaccatatcactttgttgaacgca
ttcaaccagtgggttgaaaacgagaaagacccaaattgggcatgggagagttacgtgaac
caacgtgcgttgaagcaagccagttcaatcaaagaccagttgctcggcattttgtatcgc
aacggcgtgaactcggaacaaggcgtgaaggatattagagagaggaatattaatataaga
aaggcgctttgcaaagggttcttcatgcagagtgctcatatcattaaagggaagtatcag
atcgtctcggagaatcgaattgtgttgctacacccgtcgagttgtgtcgggaaaagagag
tggatcgtgtataacgagtacgtcatgaccaaaaacgagtatgtcaggacggtgtctggt
attgagccggagtggctcttcgaggcgtccccgcagtactttgaaaagctcgaaaccttt
aagcaaagcgagacaacaagagcgctttgcagaatcaagaaggcaatgagctcgaagtaa
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