Entamoeba invadens: EIN_176300
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Entry
EIN_176300 CDS
T04133
Name
(RefSeq) DNA repair protein xp-E, putative
KO
K10610
DNA damage-binding protein 1
Organism
eiv
Entamoeba invadens
Pathway
eiv03420
Nucleotide excision repair
eiv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EIN_176300
09124 Replication and repair
03420 Nucleotide excision repair
EIN_176300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eiv04121
]
EIN_176300
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_176300
Ubiquitin system [BR:
eiv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
EIN_176300
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
EIN_176300
TCR (transcription coupled repair) factors
Cul4-CSA complex
EIN_176300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
14892975
NCBI-ProteinID:
XP_004260584
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MDEMQNHFFLSTLCPPTAVTHSVVSQMTQTHKILVVSKFNILEFYQINTEGLLFLVSKRY
PSKIEVLLKYKPVKDEDEYIIVVTASVQIDVIKLTTNLHVVSSGFLSDPFGRLSFYGMKA
VVSPNGQYLLLHIYEQLIKFVKLPQRPSDKIFATNSKISINRIIDFSFCTIADQETVVFL
HENSRDTRHVNTYIIDDHQNFVKSTFSQPNVGSSTRLVLGLPNGVNGVLVISDETACYFT
GTGDHVLVNVGKNRITTTTFLNKDMVILTDSNTGCHLLKLKVCVENSVSEILYSVLPSTE
SVAQTVSVIGGDIIFFGSSSGKSYLMRVSGEIFETWENCGPITDLKKIENKENYVINCNG
GGQECLGVIFKGSGVKELGSTSLEHVRKIHVSTNGRKEVIYTSGETQRVFEASYTKSGVQ
IKERETFDLDEVYGSGQILEDFYVVTKCGVFVRKEEKYTPIYTSRTHQLTHCKLTKTAIY
FIEESVVYRMDKNREIFKLCGLTEQATCIDVDQKIVVGLWSCDVLILSLTGCIEKTLKMR
DISRSVLQLANKLYVAFDEKLEVYEFSGLPGVIPEQVENTETLSFPSSQSTKLKLVHDVI
FVISDQGYTLQSSGLVPLAVEDMTDISETHIGTNGVIISTTRGLVIGELEPLTRLSVKKK
SSGEQNGRIGVSGLHGILVGKKVQLFNLIDGASYPSEFLLLSCDEEICMCVETISEHLYV
IGTAIIKENEVEPTVGRLLVAEEVDGKLVLKCTHEFEGAVYAIKKFKQHVLALINRHLHV
MDITNESVLPRNIIELNMIGVCMEVLGDYIIVGDFMKSVTVFVCKSDDLSQTEKAWTDIA
VSWVNAVGCIENGDSNKFVSCDVDGNVKIFVKGGEERWYIEDLLKCVGKIHVCECINFVE
KSLYKGVTLGGVSGALYNISCLSDNDYQILKKAQDMLVKDNWRQFVGTKTKEVMTNFIDG
DKIETILDWPLERQTSFCKKIGVDRSTFVGCIKKIFSDIFQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgcaaaatcattttttcttgagtactctttgcccaccgactgctgtcacg
cattcagttgtttcacaaatgacacaaacccacaaaattttagtagtgagtaaatttaac
atcttggagttctatcaaatcaacactgaaggtctcctctttttggtctccaaacggtac
ccttcaaaaattgaggtattactcaaatacaagccagtaaaagatgaagatgagtatata
attgtcgttactgcctctgtgcaaatagatgttatcaaactaacaaccaatctccatgtt
gtgtcttctggatttttatccgacccgtttggtcgtctttcgttttatgggatgaaggcg
gttgtctctccgaacgggcagtacttacttctacacatctacgaacaacttataaaattc
gtgaagttgccccaacgcccttcggacaagatctttgcgacaaactcgaagatctcaatc
aatcggattatcgacttctcgttctgcacaatagctgaccaagagactgtagtcttctta
cacgaaaattctcgcgacacaagacacgtcaacacttatattatcgatgaccatcagaac
ttcgtgaagagtacttttagtcaacccaatgtaggatcttcaacacgtctagtcttaggg
ttacccaatggagtgaatggagtcttagtgatcagtgatgagactgcctgttactttaca
ggaactggggaccatgtcttagttaatgtagggaagaatagaataactacgacgacgttt
ttaaataaagacatggtaatattgacggattcaaataccgggtgccatttacttaaactg
aaagtgtgtgtggagaattctgtgagtgaaattttatattccgttcttccaagtacggag
agtgttgcccaaacagtctccgtaattggcggagatatcatcttctttgggtcaagttcg
gggaagagttacttgatgagagtgtcgggggaaatcttcgagacgtgggagaactgtggg
ccgatcactgatttgaagaagattgaaaacaaagagaattacgtcattaattgtaatggt
ggaggtcaagagtgtcttggtgtcatctttaaagggagtggagtgaaagaacttgggtcc
acttctcttgaacatgtgaggaagattcatgtgtcgacgaatggaagaaaagaagttatt
tatacctctggagagacacaaagagtgtttgaagcaagttacacaaagagtggagtacaa
attaaagaacgtgaaacttttgatttggacgaagtatatgggagtggccaaattcttgag
gacttttatgttgtgacaaagtgtggcgtatttgtaagaaaagaagagaagtacacccca
atttatacatcgagaacacaccaactgacgcactgtaaattaacaaagacggcaatttat
ttcattgaagaatccgttgtgtatcgaatggataaaaatcgagagatctttaaattgtgt
ggattaacagagcaagcgacttgtattgacgtcgatcaaaaaatcgtcgttgggttgtgg
agttgtgatgtattaattttgagtttaacggggtgtatagagaaaacactgaaaatgcgt
gacatctcgcggagtgtgttgcaacttgcaaataaattatacgtcgcttttgatgagaaa
ctcgaagtgtatgaattcagtggtcttcctggtgtgattcccgaacaagtcgaaaatacc
gaaaccctttctttcccatcgagtcaatcaactaagttgaaattagtccatgacgtcata
tttgtgattagtgaccaggggtacacacttcaatcaagtggtcttgtcccccttgctgta
gaagatatgacggatatctcagagacccacattggtaccaatggcgttataataagtacc
acacgagggttagtcatcggcgagttagaaccgctcacccgactttctgtcaagaagaaa
agtagtggcgaacagaatgggagaattggagtgagtggtcttcatggtattcttgttgga
aagaaagtccagttattcaatttaatagatggcgcgtcgtaccccagcgaatttttgttg
ctctcgtgtgacgaagagatttgtatgtgcgtggaaaccatttctgaacatctatatgtc
atcggaacagctattataaaggaaaatgaagttgaaccaacagtcggtcgtctgttggtc
gccgaggaagttgatggcaaacttgttttgaagtgtacgcatgagtttgaaggagctgtg
tatgctattaagaaattcaaacaacacgttttggcgttgataaatcgacacttacacgtc
atggatatcaccaacgagtctgttcttccacggaatatcatcgagttgaatatgattggg
gtgtgtatggaggttcttggcgattacatcatcgtcggtgacttcatgaaatccgtcaca
gtctttgtgtgtaaaagcgacgacctgtcacagacagaaaaggcttggactgatattgcc
gtgtcctgggtgaatgcggtggggtgtattgagaatggagactccaataagttcgtttcg
tgtgacgtcgatggaaatgtcaaaatatttgtgaaaggtggagaagagcgttggtatatc
gaagatcttttgaagtgtgtcggtaaaattcatgtgtgtgagtgcatcaacttcgttgaa
aaatcgttgtacaagggggttacacttggcggggtcagtggtgcgttgtacaacatttct
tgtctgtcggacaacgactaccaaatactgaaaaaggcacaagatatgcttgttaaggac
aactggaggcagtttgttgggacaaagacaaaagaggtgatgaccaactttattgacggg
gacaagattgaaacaattttggattggccactggaacgccagacgtcgttttgcaagaaa
atcggtgtagaccgctcaacttttgttggctgcataaagaagatattttccgatatattt
caatga
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