Entamoeba invadens: EIN_226230
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Entry
EIN_226230 CDS
T04133
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1, putative
Organism
eiv
Entamoeba invadens
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SMYLE_N
Motif
Other DBs
NCBI-GeneID:
14887345
NCBI-ProteinID:
XP_004255031
UniProt:
A0A0A1U5W2
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSQEELRKTFQDKPVDLSQASFDFYSADEIRHLSVKEVTKGATFDLLGNPEENGLYDPSL
GVIERRGVCRTCGLNEDNCPGHFGHFELEEPMYNPLMFDQLILLLRSICLECFTLKASQQ
TLLGVAIELARLDKNDIGGALAINELAEEAKKVQMRANASRGKLKHEQENEEYDYETDVN
ISNKLLKIFENECSKRIKKEPGYIHTEIQKRNVVKSFLMHMASLSQKKCPCCGKISPKIK
KSDNKYSIWFYGETAGVSTKEDGKKYDTTPSFIMNILKQAWEKDKVQKEVLSRLCYTQMR
GGDKLDVILPSYHMFFVECLPIPPSRFRPLNRFGNMISDNPQTSYYKAIIENSQNLHLKR
GKKEITLTENMLIENMQKGYNQLILNKDSSMPASIKTTLEHKVGLFRSNMMGKRVNYAAR
TVISPDPFIPTNTFGIPMPFAMRLSVATPVNERNFEEMKKAVVNGPMTWPGALSIEDEWG
KTYLLPDDSDPYSVSKRQGEADRLLAVDPTAPRNFKTVRRHVIDGDMILTNRQPTLHKPG
IMGHYVKVLKVEKTMRMHYSNCNTFNADFDGDEMNMHLPQSIIARSEIQNIALSDEQYVV
PKNGQPLRGLIQDHIISSFMLTKRNTFFNREQFCQIVSDALYGVNESYSISLPTPTILKP
TMLWTGKQVVSAILLHVGTNQPHINFTGKCKVSTNEIGEGGYQTEEQKKLRTQKDGFREK
WDGANDSQCIIKESVLITGTLDKNQIGASNGGLIHCIYELYNAKTAGLCLSIFSRLLTNY
LQRVGHTCSLDDCMLTPEFDAKRTELLNKANEVSRAATAKHFGLTGRSKFDIDVAFSNAR
RRVESAKDLDNAVKSEVNDCTSLVIKECIPNGQLKAFPWNCLALMTTTGAKGSKVNHSQI
TCLLGQQELEGRRVPIMATGKTLPSFPRYDASAKAGGFIAARFLTGVPPQEFYFHCMAGR
EGLIDTAVKTANSGYLQRCIIKMMESLHVEYDYTVRESDGSIVQFMYGDDGIDVMKSAFL
NNIDFWAKNYKAIVTKYDTASIARSFKDGYKEAMKLHRDCSKHPEKHDPVLSVYSPGNNL
AACSEKYYNLVNQYIKEDKNKDFKEGRLDEKKFRTMMMVRYNKCLVNPGEPVGIVAGQSI
GEPSTQMTLNTFHLAGRGDVNVTLGMPRMKELVMFAKRNISTPSMVLYLNDPNQKNTEDL
AKKLTKVTLDNIVEGITCIDSIVTEGSVRKRKYHVKLQLVSNYKTLVEFVEKQLVEKIQG
AIHTEIVKKLKIKDVNDVTYNDAGNEETGAVVVQEESDKKHEKVKKGLKATRDEDEKSDE
SSEESVDKNMSEEPEKSEETDKSEESEDEKKKPKKKENKTKITKEVKNLEVEITLGVNDK
VSMVSVVEKVITKIVLYECPKIKRGLPLTKKKDGKTLYYVMTEGVNLRKMAEFAEYVDVN
TIESNDVYAVSQTYGVEAARAVLINEIGGVFRAYGIEVDSRHLNLVGDAMMFEGEYKPLN
RSGMDSNPSVFTKITFETSLSFLAKACMSGQIDNLHSPSSTLTLGKHTTFGTGSFDLLND
YVMKSD
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaagagttgcgaaaaacgtttcaagacaaacccgtcgacttgagtcaagcg
tccttcgacttttattcggccgatgaaatccgacatttgagtgtgaaagaagtgacaaag
ggggcaacttttgatttattaggaaaccctgaagaaaatggattgtacgatccttcactt
ggtgtcattgaaagaagaggtgtatgtcgcacttgtgggttgaacgaagacaattgccca
ggccactttggtcattttgaactcgaagaacctatgtataacccacttatgttcgaccaa
ttgattcttcttttaaggtcaatttgtttggagtgtttcaccttaaaagcatcacaacaa
acccttttaggggttgccattgaacttgcacgacttgataaaaatgatattggtggtgcc
ttagcaatcaatgaattggctgaagaagcaaagaaagttcagatgagagcaaatgcttct
cgaggcaagttaaaacatgaacaagagaatgaagaatacgactacgaaacggatgtgaac
atctcaaataagttactcaagatttttgagaatgaatgctcaaaacgtatcaaaaaagaa
ccgggatacatccacactgaaattcaaaagaggaacgttgtgaaatcgtttctgatgcac
atggctagcttatcacaaaagaagtgcccgtgttgtggaaagatatctccaaagatcaaa
aagtccgacaacaagtattccatttggttttatggagagacggctggtgtatctaccaag
gaagatggtaaaaagtatgacacgaccccatcctttattatgaacattttgaaacaagct
tgggaaaaggataaagtgcagaaggaagtcttgagtcggttatgttacacgcaaatgcgt
ggcggtgacaaattggatgtgatcttaccgtcgtaccacatgttctttgttgagtgcctt
cctatcccaccttcacgctttagaccattgaatcgatttggtaacatgatctctgataat
ccacagacttcttattacaaggcgattattgaaaacagtcagaacttgcacttgaaacga
ggaaagaaagaaatcacactaacagagaatatgttgatagagaacatgcagaaaggatat
aaccaacttattctgaacaaagactcgagtatgcctgcttctatcaaaactactttggaa
cataaagtcggtcttttcagatcaaacatgatgggtaagagagttaactatgcggctaga
accgtcatctcaccagaccctttcatcccaacgaacacttttggtattcctatgccgttc
gctatgagactttctgtcgcaacgccagtcaatgaaagaaactttgaagagatgaaaaag
gctgttgtcaatggcccaatgacttggcccggcgctctatctatagaagatgaatggggt
aaaacctatttgttaccggacgactccgacccttattctgtttctaagagacaaggtgaa
gctgaccgattgcttgcagttgatccgactgccccacgaaacttcaaaaccgtcaggaga
cacgttattgatggggatatgatcttgactaatagacagccaacactccacaagcctgga
attatgggtcattacgtcaaagtattgaaagttgaaaagaccatgagaatgcattactcg
aattgtaacacatttaatgccgattttgatggtgatgaaatgaatatgcacttgccacag
agtatcattgcgagaagtgaaattcagaacatcgcactgagtgacgagcagtacgtggta
ccaaagaatggacaacctttgagaggcttgatccaagaccatatcatctcatcgtttatg
ctcacgaagagaaacacgttctttaacagagaacaattctgccaaattgtttctgatgcg
ctgtatggtgtcaatgaatcgtattccatctcattaccaacaccaactattctgaagcca
actatgctctggacgggaaaacaagttgtttctgctattttactccatgtcggaactaac
cagccacatatcaactttactggtaaatgcaaggtgtcgacgaacgaaattggagaaggt
ggatatcagacggaagaacagaagaaacttcgaacacagaaagatgggttcagagagaag
tgggacggtgccaatgacagtcagtgcatcattaaagagtctgttttgatcactggaacg
cttgataagaatcaaattggtgcttctaatggtggactgattcactgcatttatgagtta
tacaatgcgaagactgcgggactttgcttgtccattttctcacgacttttgacgaattat
ttgcagcgagtggggcatacctgttcattggatgactgtatgttgactccagaatttgat
gctaaaagaacggaattgcttaacaaagccaatgaagtgtctcgtgctgccacagcaaaa
cactttggattgactgggagaagtaaatttgacatagatgtagcgttctctaatgcaaga
agaagagttgaatctgcgaaggatttggacaatgccgtcaagtctgaagtgaatgattgc
acttctttagtaatcaaagaatgtattcctaatggccaattgaaggcattcccatggaat
tgtcttgcgctgatgacgaccactggagctaaaggttcgaaagtgaatcattctcaaatc
acttgtttacttggacaacaagaacttgaaggcagaagagtacctataatggcgacggga
aagactttgccgtcattcccaagatatgacgcgtcagctaaagctggaggattcattgca
gctcggttcttgactggtgtacctccacaagagttctatttccattgtatggctggaaga
gaaggtttgattgatactgctgtcaaaacagccaactctgggtatttgcagcgatgtatt
attaagatgatggagtcgttacatgttgaatatgattatacagtaagagaatccgatggg
tcaattgtccagttcatgtacggtgatgatggcatcgacgttatgaagagcgcctttttg
aataacattgacttctgggcgaagaactataaggctattgtgacgaagtacgacactgct
tctattgctcgatctttcaaggacgggtacaaagaagctatgaagttacacagagactgt
tcaaaacatcccgaaaaacacgacccagtcctctctgtgtattcaccgggtaataatttg
gctgcatgcagtgagaagtactacaacttggtcaaccaatatatcaaagaagataagaac
aaagatttcaaggaaggtagacttgacgagaaaaagttccgtacgatgatgatggtgagg
tacaacaagtgcttggtgaacccgggagagccagttgggattgttgctggtcagtccatt
ggagagccgtcaacacagatgacgctgaacacattccatcttgctggaagaggtgatgtg
aacgtcacgcttggtatgccaagaatgaaggaattggtcatgtttgccaaaagaaacatt
tccacgccatctatggtcttgtacttgaatgacccaaatcaaaagaacacggaagacctc
gctaagaaacttacgaaagtcacattggataacattgttgaaggcatcacttgtatcgat
tccattgttactgagggaagtgtcaggaagagaaaataccacgtcaagctccaacttgtg
tcaaattataaaacccttgttgaatttgtagagaagcaattagtcgaaaagatccaaggt
gccatccatacggaaattgtaaaaaaattgaaaatcaaggatgttaatgatgtgacttac
aacgacgcaggtaatgaagaaactggtgcagttgttgttcaagaagaatcggataagaag
catgaaaaggtcaagaaaggactgaaggctactcgagatgaagacgagaagtctgacgag
tcttctgaagagtctgttgataaaaatatgtcggaagaacctgagaagtctgaggagact
gataagagtgaggagagcgaagatgagaagaagaagccaaagaagaaggagaacaagact
aaaataacaaaagaagtgaagaacttagaagttgaaatcacacttggtgtgaacgacaaa
gtgtctatggtttctgtggtcgagaaagtcatcactaaaattgtcttatacgaatgtcct
aagatcaaacgaggtcttccattgaccaaaaagaaagacgggaagacgttgtattacgtc
atgactgaaggtgttaacttacggaagatggcagagtttgcggagtatgtcgatgttaac
acgatagagtcgaatgacgtctacgcggtctcgcagacttatggtgtcgaagccgctcga
gctgtcttaataaacgagataggaggtgtctttagagcgtatggtattgaagttgattcg
agacacttgaatcttgttggtgatgccatgatgtttgaaggagagtataaaccattgaac
agaagtggtatggatagtaacccatccgttttcacaaaaatcacgtttgagacgtcactc
agtttcttggccaaagcttgtatgtctgggcaaattgataatctccacagcccgtcaagc
actcttacccttggaaagcacacgactttcggtacaggctcgttcgacttgctcaacgac
tacgtaatgaaaagtgattga
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