Entamoeba invadens: EIN_229820
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Entry
EIN_229820 CDS
T04133
Name
(RefSeq) TFIIH basal transcription factor complex p52 subunit, putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
eiv
Entamoeba invadens
Pathway
eiv03022
Basal transcription factors
eiv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EIN_229820
09124 Replication and repair
03420 Nucleotide excision repair
EIN_229820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_229820
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_229820
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EIN_229820
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EIN_229820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
14887088
NCBI-ProteinID:
XP_004255220
UniProt:
A0A0A1U347
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MENILEKDVLKYFQDFPEGAYRVIYQTKWSSSGIFRLLPSLCQSLLLRLVFLSSTIDLPT
VEKQFTITKQEIIHVLSLLESVKIIKKVMINGKTQFQMNADFQTHLKESILGPMVPNYVV
SDCNFSVKDALIKKASLNNAVKMFEDFLMKLLTFNESHNLPKSAFELFKDLELVNDAGSQ
ITRKGYQFLFQETKTQIWILMLSIFGPAQRKRRMGKLINEFFELTYLAPETCYNADPFTK
IYSAAPLILFDMMGIIAYSKEKNALVVTPLMSLLRSNALVPSDLVTKPRTITETNYTVYI
YTESFFQVKLYSLFIRQNLQLTNLCVGRITYDTVTEAFLKGITNEMLVNFLQPNLPKNIQ
AQIDLWKRELNRLKEVRAVKFRFYEPELEVQKELYHLTKSEAEKMKGVVFYKEEELTLFV
RYDVAEKIKEFLRRKTREESFIARLRKSESDEKKESRSFSSFPQRGISRQEPSKSISRSE
SKSFKDQRSISRPDTKRPPISNPGVNKRLPEPTQIKSVPTKKSYVLSDSDD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatcctcgagaaggacgtgctgaagtattttcaagacttcccagagggagcg
tatcgagtcatttatcaaactaaatggagtagttcggggatctttcgattgttgccatca
ctatgccaatcacttctactccgactcgtctttttgtcgtcgaccattgacttacccact
gtagaaaaacaatttacgataactaaacaagagatcatacacgtcctctctttgctcgaa
agcgtcaaaattattaagaaagtgatgatcaatgggaagacccaattccaaatgaacgcg
gacttccaaacccatttgaaggaatctattcttggcccaatggtgccaaactatgttgta
agcgactgcaatttcagtgttaaggatgctctgatcaaaaaagcttcactgaataacgcg
gtgaagatgtttgaggactttttaatgaaattactgacattcaatgagtcccacaattta
cccaaatcggcgtttgaactcttcaaagaccttgaacttgtcaatgacgcgggttcacaa
attacaagaaaggggtaccaattcttgttccaagagacaaagacacagatttggattctg
atgctgagcatctttggaccggcacagaggaagagaaggatggggaagttgatcaacgaa
tttttcgagttgacttatttggctccagagacatgttacaatgcagacccattcacaaaa
atctattctgcagcaccactgatattgtttgatatgatggggattattgcgtattcgaaa
gagaagaacgcacttgttgtgacgccgctgatgtctcttttaagatcaaatgcgcttgtc
ccgtcagacttggtgactaaaccaaggacaatcactgagacgaattacacagtgtacatt
tacacggagagtttcttccaagtgaagttgtactcgttattcattcgacagaatttgcaa
ttaaccaatttgtgtgtggggaggattacatatgatactgtgaccgaagcgtttttgaag
ggtatcaccaacgaaatgcttgtcaattttttgcaaccgaatttgccaaagaacattcag
gcacaaatcgacttgtggaaacgagagttaaatcgactgaaagaggtgcgggcggtcaaa
tttcgattttatgagcccgaacttgaagtgcaaaaggaactctaccacttgaccaaaagt
gaagcagagaagatgaagggagttgtcttttataaagaagaagagttgaccttgtttgtc
aggtatgacgttgcagagaaaatcaaagagttcttgcgacgaaagactcgagaagagagt
ttcatcgcacgacttcgaaaatcagagagcgacgagaagaaggaatcaagaagcttttcg
tcattcccacagcgtggaattagtcgacaagaaccttctaaatccatttcccgctccgag
tcaaagtcgttcaaagaccagcgctcaatttcgcgaccagatactaaaagaccgcccatt
tcaaacccaggtgttaataagcgtcttccagaaccaactcagattaagtcggtgcccaca
aagaagagttatgtcttatcagactccgatgattga
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