Entamoeba invadens: EIN_252450
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Entry
EIN_252450 CDS
T04133
Name
(RefSeq) ATP-dependent RNA helicase SUB2, putative
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03013
Nucleocytoplasmic transport
eiv03015
mRNA surveillance pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_252450
09122 Translation
03013 Nucleocytoplasmic transport
EIN_252450
03015 mRNA surveillance pathway
EIN_252450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_252450
03041 Spliceosome [BR:
eiv03041
]
EIN_252450
Enzymes [BR:
eiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIN_252450
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EIN_252450
Spliceosome [BR:
eiv03041
]
Complex C
Other components
EJC/TREX
EIN_252450
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EIN_252450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
14893811
NCBI-ProteinID:
XP_004261792
UniProt:
A0A0A1UEM1
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MADMTIDIPSYTPMETASIKVETTNKDNYVGIIPFQEMGLKKEIMQAITDCGFEHPSEVQ
SQVIPKALIRQDILCQAKSGMGKTAVFVITILNQGLFIGKKGVSTLVICHTHELAKQVQK
EFDRMKKRLETAIEKEINTASYIGGTPEADDAEDLKNRSPSIVIGTPGRLLGLFNKGVLD
LSQLDTFVIDECDKVLSSNSQIDVTTLFMKSNKTKQTMMFSATISEPNKVICRKYLRNPL
EVFIDDGEKLFLHGLKLYYKKLDDKQKVAKLTDILDYIDFNQCMIFVDGKERCKVVIETL
KKGEYPCGVLYGKMEEELREKEFERFRKGESRILVATDLCGRGIDIERVNLVVNFDMPED
SDQFLHRVGRAGRFGTKGLAVSFVDSEDDQKIMDEVQNRFSLKMPELPDDIKEIPSNYYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgacaattgacattccaagttacactccgatggagaccgcctccatcaag
gtggaaacaactaacaaagacaattatgtcggtatcattccatttcaagagatggggttg
aagaaagaaattatgcaagcgattactgactgcgggtttgagcacccgtctgaagtccag
tcgcaagtcatcccaaaggcgttgatccgtcaagacattttgtgccaagcgaagtctggt
atgggtaaaaccgccgtattcgttatcaccatattgaaccagggacttttcattggaaag
aagggcgtgagcactttggttatctgccacactcacgagttggccaaacaagtccaaaag
gaatttgacagaatgaaaaagagactcgagacggctattgaaaaggaaattaacaccgca
agttacatcggaggaactccggaggccgacgatgccgaggatttgaagaatagatctcct
tctattgttatcggaactccagggaggttattgggactcttcaataagggtgttctcgac
ttgagtcagttggacacttttgttattgacgagtgcgacaaggtattatcatccaactcg
caaattgatgtgacaactctctttatgaagtcgaacaaaacaaagcaaacaatgatgttc
tcggctacaatcagcgagccgaacaaagttatttgcagaaagtatctgagaaacccactt
gaagtctttattgatgacggagaaaaattgttcttgcacggacttaaattgtattacaaa
aaactcgacgacaaacagaaggttgccaaactgacagacattttagactatatcgacttc
aatcagtgcatgatctttgttgacggaaaggagagatgcaaagttgttattgaaacgttg
aagaagggcgaatacccatgcggtgtgttgtacgggaaaatggaagaggagctccgtgag
aaggagtttgagagattcagaaagggagaaagcagaattttggtagccaccgatttgtgt
ggaagaggtattgatattgaaagagtgaacttggttgtcaactttgatatgccagaggat
tctgaccaatttttgcacagagttggtagagccgggagatttggaaccaagggtttggcc
gtttcgtttgttgactcggaggatgatcagaagatcatggacgaagttcagaaccgattt
tcgcttaagatgccagagttgccggatgacatcaaagaaattccatccaactattacaag
taa
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