Entamoeba invadens: EIN_359900
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Entry
EIN_359900 CDS
T04133
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03013
Nucleocytoplasmic transport
eiv03015
mRNA surveillance pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_359900
09122 Translation
03013 Nucleocytoplasmic transport
EIN_359900
03015 mRNA surveillance pathway
EIN_359900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eiv03019
]
EIN_359900
03041 Spliceosome [BR:
eiv03041
]
EIN_359900
03009 Ribosome biogenesis [BR:
eiv03009
]
EIN_359900
03012 Translation factors [BR:
eiv03012
]
EIN_359900
Enzymes [BR:
eiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIN_359900
Messenger RNA biogenesis [BR:
eiv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EIN_359900
mRNA cycle factors
Stress granule specific factors
EIN_359900
Spliceosome [BR:
eiv03041
]
Complex C
Other components
EJC/TREX
EIN_359900
Ribosome biogenesis [BR:
eiv03009
]
Eukaryotic type
90S particles
Helicases
EIN_359900
Translation factors [BR:
eiv03012
]
Eukaryotic type
Initiation factors
eIF-4
EIN_359900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
14889828
NCBI-ProteinID:
XP_004257668
UniProt:
A0A0A1U7R4
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MSDKSDNVPVYDAFEKMHLKEEILKGIYKQGYSKPSPIQQRAIVPISEGRDVIAQSQSGT
GKTATFSTGVLQLVEPQKREVQVIIVSPTRELATQSENVIEGLSQYLTISVRACVGGKSE
KEDVKAIERGCQVVSGTPGRLLTLIKKRVLAVKFVKVIVLDEADQMLDKGFTRAIYDIFK
YLPERRQIVLCSATLTPEVLEIASLLMKNPLRILTKREKVTLDIIKQYYVKLAREDQKFD
TLCEIYDTMTITQSVIFCNMRKKVDWLTENMLKANFPVISMHAEMPQEEREYVMNVFRKG
EKRVLITTDIWARGIDVTQISLVVNYDFPNNREVYVHRIGRSGRFGRNGVAINFVLDSEM
NELKDLMDYYSTKINVLPENFADL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgacaacgttcctgtgtacgatgcctttgaaaagatgcatttgaaa
gaggagattttgaagggcatttataaacaaggttatagtaaaccctcccctatacaacag
cgtgcgatcgttccaataagtgaaggtcgtgatgtgattgcccaatcgcagtcggggact
ggtaagactgctacgttttcaactggagtattacagttagttgagccacagaaacgggag
gtacaagtaataatagtctccccaacacgtgaattagcaacgcagtctgaaaacgtcatt
gaaggtctttctcagtacttaacaatttccgttcgcgcttgtgtcggtggtaaatcggaa
aaggaagacgtcaaagccattgaacgtgggtgtcaagtcgtatctggtacccccggtcgt
ttactcacgttgatcaaaaagagggttttagccgttaaatttgtcaaagtgatagtctta
gacgaggccgatcaaatgcttgacaaaggcttcactcgtgccatttacgacatcttcaaa
tatcttccggagcgccggcagatcgttttgtgttcggccacattaactcctgaagtcctt
gaaatcgcgagtttattaatgaagaatccactccggattttgaccaaacgagagaaagtg
actcttgacatcatcaaacagtattacgtcaaattagctcgcgaagatcaaaagttcgat
actttatgtgaaatttatgacactatgactatcactcaatcagtcattttctgtaacatg
cgaaagaaagtcgactggctaacggagaatatgctcaaggcaaatttccctgtcatctca
atgcatgctgagatgcctcaagaggagcgagaatatgtgatgaatgtctttcgaaaaggc
gagaagcgcgtgttaatcactacagatatctgggcaagaggaatcgatgtcacacaaatc
agtttagtcgtgaattatgacttccccaacaacagggaagtctatgtccacagaatcggg
cggagtggccgtttcggcagaaatggcgttgcaattaatttcgtgttagacagtgagatg
aatgaactaaaagacttaatggactattattcaacaaagatcaatgtgcttcctgaaaac
tttgctgatttgtag
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