Entamoeba invadens: EIN_369480
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Entry
EIN_369480 CDS
T04133
Name
(RefSeq) DNA damage-binding protein, putative
KO
K10610
DNA damage-binding protein 1
Organism
eiv
Entamoeba invadens
Pathway
eiv03420
Nucleotide excision repair
eiv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EIN_369480
09124 Replication and repair
03420 Nucleotide excision repair
EIN_369480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eiv04121
]
EIN_369480
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_369480
Ubiquitin system [BR:
eiv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
EIN_369480
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
EIN_369480
TCR (transcription coupled repair) factors
Cul4-CSA complex
EIN_369480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_EMC1_N
Beta-prop_EML
CCC
Motif
Other DBs
NCBI-GeneID:
14891646
NCBI-ProteinID:
XP_004259397
UniProt:
A0A0A1UBM3
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MERKFYETTVAPATAITHTVIGKLEEGPTQFLITSRNVYVDIYEMSENGLKQRYSQMFPY
SITLIQTYRVTEGKSIRDFVIILTSNHQLTITRLEGNTLKVVFGISVEDRLGRKAFYGAL
GVVMQNKYLILYLYNHQIKIISLPQGDEELLSQSVKSVRIDQERIVGMHIIGDNQIALHS
DQNTKKTVVFYEVKTDDFSVSNSTEYQPIENVDFFVAHNNGFFVVQNGSLQYHYNTNTKS
INVALPQITIATTCFLDNNRLLLCDNTGKSHLITLRLDVEQVHYYPLPFAKLSIPSKVVY
LDNGVLFWGSSGGNSYLIKIGEERMEVLETFENRGPILDMITLHDEISKKDDLLICSNTY
HQGTLKLLRSGVGVNILGEVEYRGIEKMWKCFENAGDMSDDYKEMYVIEGAFGSNFVHIE
GRKGDVQIVEIANSVTVKGRIVGVGDFDGKLVVVTNGGISIARVHDTIVEEQFVSTEEIT
HCVSEGKDVVYSGRNTVKLFDAEKCVMSDIKRYEEEISSIGCYTVSSENTRERYIGVGRW
EHKEIEIIDDQGDVLDRVYIGDVVSKSIKFVGTPSTLKVIIGLGDGRVVVSNIRKKNSTQ
MEEEHKVGKVIEVGMGGVSIDEMAIDGKMYEICVCERPTLMSLDDDKIKMMSVNIGESVG
FLGVHITGIPNSVLIASKESLMIGSIEEVKAINTKSLELGVFVSRVVVSSDGRSGVLLSS
EIEETRSGKNEVHFINLIDLRKMEIIDKVRLDKDEHGMAIDVKEIEEKELYIVGTAYAKL
GEVEPSRGRFIIFEIHEEKIIEVSNRYVDGAVYSVKRFENDVGNYIAATIQKKVVVYQIE
RKIVDGKFAVTIEEKGGANVKLIGLFVKTLGHEILVGDLMKSISVFKFDEKATRNAVVET
CRDFYASYTTAVEFMDEHCFMSSDSQGNLLVFTENTTTTNENEKFKLQNEAHIHVGECIN
VMCKGSIAVMNNAMWETQKKCMLFGGICGSIGGITEINLETYKKLFALESEMLREMKGVI
ECESFGQWKMVFDDWKRMEAQNVIDGNVVELFLDLPKESQKHIAEKIGYAGEELVTVLES
MNTIFH
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaagttttatgaaacaacagttgcgcccgcgactgcgatcacgcacacagtg
atagggaagttggaagaaggcccgacgcaatttttaatcacatcacggaatgtgtatgtt
gacatctacgaaatgagtgagaacgggttgaagcaacgatacagtcaaatgtttccatat
tcgataacgttgatccaaacgtatcgagtgactgaaggaaagagtatacgagactttgtt
ataatactaacgagtaatcatcaacttactatcacacgacttgaagggaatacattgaag
gttgtctttggtatttcagttgaagatcgccttgggagaaaggcgttttatggagcgttg
ggtgtggtgatgcagaacaaatatttgatactttatttgtataaccaccaaatcaaaatc
atttcactgccacaaggagatgaggaactattgagccaaagtgtcaaaagtgtgagaatt
gaccaggaaagaatagtcgggatgcacatcattggagataatcaaattgctctccactcg
gatcaaaacacaaaaaagaccgtcgtgttttatgaggtgaaaacagacgacttctctgtt
agtaattcaacggaatatcaaccaatagagaacgtcgatttcttcgtcgcacataataac
ggcttcttcgtcgtgcaaaacggatcactccaatatcactacaatactaatacaaagagc
attaacgtcgcattgccacaaatcacaatcgctacaacatgcttcttggacaataatcgc
cttttgctctgcgacaataccgggaagtcccatctcatcactttgaggcttgacgtggaa
caggtccattactacccccttccctttgccaaattgagtattccatcgaaagtggtgtat
cttgacaatggggtgttattctggggatcgagtggaggaaacagttatttaattaaaata
ggagaggagaggatggaggtacttgaaacgtttgagaacagaggaccaattctcgacatg
atcaccctccacgacgagatctcgaagaaggacgatttactgatatgtagtaacacctat
caccaaggcacattgaagttgttacggagtggtgttggggtgaatattcttggggaggtg
gagtaccgtgggattgaaaagatgtggaaatgctttgaaaatgctggtgatatgagtgac
gattataaagagatgtatgtcatcgagggggcatttgggtcgaattttgtgcatatagaa
gggaggaaaggagacgtccaaattgttgagatagcaaatagtgtgacggtgaaaggacgg
attgttggagttggagattttgatgggaaattagttgttgtaacgaatggtgggatttca
atagcacgagtgcatgacacgattgtcgaagagcagtttgtgagtactgaggagattaca
cattgtgttagtgaagggaaggatgttgtgtatagtgggaggaataccgtgaaattattt
gacgctgaaaagtgtgtgatgagtgatatcaaaaggtacgaggaggagatatcaagcatt
gggtgttacactgtttcttctgaaaatacacgtgagaggtatattggagttggtcgatgg
gagcataaagagatagagatcatcgacgaccaaggtgatgtactcgaccgggtgtatata
ggagatgtggtgagtaaaagtattaaatttgttggaacgccttcgactcttaaagttata
attgggttaggggatggtcgtgtagttgtctcaaacattcgaaagaagaattcgactcaa
atggaagaggaacataaagtagggaaggttattgaggtaggaatgggtggtgtgagtata
gatgaaatggcgatagatgggaagatgtatgagatttgtgtgtgtgagcgtccaacgttg
atgagtttagatgatgataaaatcaaaatgatgagtgtgaatataggggagtccgtcggg
tttcttggtgtccacattactgggataccaaacagtgttttaatagcaagtaaagaaagt
ttgatgattggaagtattgaggaggtcaaagcaattaacacgaaaagtctagaattgggt
gtttttgtgtcacgagtagtggtgagttctgatgggagaagtggtgtgttattgtcgtcc
gaaattgaagagacgcgaagtgggaagaatgaagtgcatttcatcaatttgatagacttg
agaaagatggaaataattgacaaagtgcgacttgataaagacgagcatgggatggccatt
gatgtgaaagaaattgaagagaaagaactgtacatagtaggtacggcgtatgcgaaacta
ggggaagtcgagccgagtcgtgggcggtttatcatatttgaaattcacgaagagaagata
attgaagtatccaacagatatgtagatggtgcggtgtattctgtgaaacgatttgagaat
gatgttgggaattacatagccgcgacgattcagaagaaggtagtagtttaccaaattgag
aggaaaatagttgatgggaagtttgcggttactattgaagagaaaggaggagcgaatgtg
aaattgatagggctatttgtgaagacattggggcatgagatattagttggtgatttaatg
aagtcaatttctgtgtttaaatttgacgagaaagcgacgcggaatgccgtagttgagacg
tgtcgagacttctatgcgagttacaccactgccgtagaatttatggacgagcactgtttt
atgagtagtgattcccaagggaatttgttggtgtttacagagaacacgacaacgacgaat
gagaacgagaagttcaaattacagaatgaagcgcatattcatgtgggggaatgcattaat
gtgatgtgcaaaggatcgattgccgtgatgaataatgcgatgtgggagacacagaagaag
tgtatgttgtttggtgggatttgtgggagtattggagggatcactgaaatcaatttggag
acgtacaaaaaactctttgcacttgaaagtgagatgctgagggagatgaaaggagtcatc
gagtgcgagtcgtttgggcaatggaaaatggtatttgatgattggaaaaggatggaagcc
cagaatgttatcgatgggaatgtcgtggagttgttcttagatctgcctaaagagtctcaa
aagcacatcgcggaaaaaattgggtatgcaggagaagaacttgtcactgtgttggaaagt
atgaacactatctttcattga
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integrated database retrieval system
