Entamoeba invadens: EIN_389920
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Entry
EIN_389920 CDS
T04133
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1, putative
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIN_389920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_389920
Enzymes [BR:
eiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIN_389920
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
EIN_389920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
14888440
NCBI-ProteinID:
XP_004256178
UniProt:
A0A0A1U5A2
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MTEEKGKRRDFKGKSNGKISIEKEDIPFIGGSERPSKITTIQFTMFDKTQMNRIGEFEVN
QPNLFVIGSRQPNPDGVLDRRLGVCDSVNTCKTCGKNVDECCGHFGEINLALPVFHIGFF
RPIIQVLQCVCKNCNRLLLTDEEREYYLKRMRNKTTDTIQRTMLVRALIVQCRKHYNGCP
HCNAINGSVRKYGNIKLVHDKYHKDPNLNEMNEFYDGFDESIKMDKEIGAFLGNAQEDLD
PLRVLNIFKSLVREDIEAMDFSPDAPPEKLILTSVPVPPLTIRPSVSMDGGNASNEDDLT
TQLKEVVECNTKIIALMEKGYSPYQFYEAWDQLTVAVSLIINSDLPMCEEKGKPLRSLCQ
RLKGKHGRFRGNLLGKRVDFSGRTVISPDPNLDVEQLGVPQLMAITLTYPERVTRYNIEK
MRQLVRNGPDTYPGCNGIIMIDGNRRSMMIKPEMREKFAKELRIGEIVERHLEDGDIVLF
NRQPSLHRISIMCHIAKVLPWRTMRFNECVCTPYNADFDGDEMNLHVPQTEEARAECLML
MHSAKNLQTPRTGQMIIAETQDFLTVSFLLTAKDFVVTEEEMMLWSCWFHNAGVEIRLPT
PAYLKPKKLWTGKQLYGLALRPNPNFGVDICLDAPSKNYSKEGKWMCMKDGWICFKHSQL
VCGQIDKAIIGSGNKSGLFHLILRDYGLLDSAKMMAHISRFCARFLGDYGFSIGISDVTP
SLSLTRMKEELVGEGYAKCDQFIKSYNDGKQEIQPGSTPEQTLEALLNSELSQVRERAGK
RCIDELRCDNSPLVMALCGSKGSVINISQMIACVGQQTVNGGRVSDGFISRSLPHFPLHS
RTPQAKGFVKNSFFTGLNATEFFFHTMGGREGLVDSAVKTAETGYMQRRLMKALEDLHVH
YDGTVRSAGMTVIEFKYGDDGLDPLKVECDIDPINYESVLANLQQHQKTEDLYITPKTFD
SYYKEALTGVQIVTDLWKSQLDVFMEKKKSEMSEVYTHYSEKSVRDGLCGITVDTMKKFV
KVCEQKGLRNICEPGTPVGALAGQSMGEPSTQMVLKTFHFAGVASMNIALGVPRIKEIIN
ASKKIQTPIVTAKLVNSKDVTSARIVKGRIEATKLKEIAKSVKIVFKPAEAYVSIKLDFE
TIKQLQLECSAEKVHDILLNTRGLKLKEKQVLVRNVDKLRVYVDKVNTSLLFSLNALRNQ
LLEIIVCGIEGTGRAVINKSKIGFELLVEGSELLKVMGVAGVIGESTTCNHIMVVEKVLG
IEAARSTIISEIKNVMDAYGLSIDIRHLLLLSDLMTFKGVILGITRYGISKMKDSVFTFA
SFERTNDHLFDAAVHSRQNDIAGVSESIIVGNQVGLGTGLMSIMYDPPKPIVFYKKYDPL
F
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaaaagggaaaacgccgagacttcaaggggaagtcgaacggcaagatttcg
atagagaaggaagatatcccatttatcggagggtctgaacgtccgagcaaaatcacaacg
atccaatttacgatgtttgataagacacagatgaaccgcattggagagtttgaagtgaac
caaccgaacttgtttgttattgggtcgagacaaccgaatccggatggagttttggatcga
agactgggagtgtgtgattctgtgaacacatgcaagacatgcgggaagaatgtcgacgag
tgttgcgggcactttggagagatcaatttagcgcttccggtgttccatatcggattcttc
cgcccgatcattcaagtgttgcaatgtgtctgcaagaactgtaatagactgttgttgact
gacgaggagcgggaatactacttgaaacgaatgagaaacaaaacgacggataccattcag
aggacgatgttggtccgtgcgctcatagttcaatgcagaaaacactacaatgggtgtccg
cactgtaacgctatcaatggaagtgtgaggaaatatggcaacatcaaattggtgcatgac
aagtatcacaaagatcccaatttgaatgagatgaacgagttttacgacgggtttgatgaa
agtattaagatggacaaggaaattggcgcgtttcttgggaacgcacaggaggacttggac
ccgttgagagtgttgaatatattcaagtcgttggttagagaagatatcgaggcgatggat
ttctcaccggacgcaccgccagagaaattgatattgacttctgtgcctgtcccgccatta
actataaggccgtccgtctcgatggatggtgggaatgcatcgaatgaggatgatttaaca
acgcaattgaaagaagtagtcgagtgtaacacgaagatcattgctttaatggagaaggga
tattccccatatcaattttatgaggcgtgggatcaactgactgttgcggtgtcgttgatc
attaactctgatttgccgatgtgtgaggagaaagggaaaccgttgcgatcgttgtgtcaa
cgactgaaagggaaacacggtcgatttagagggaacttattggggaaaagagtcgacttt
tcgggaagaactgtcatttcccccgatcccaatttggacgtggaacaacttggagtacct
cagttgatggcaatcacactgacataccccgagagagtcacgcggtataatattgagaag
atgcgtcagttggtaagaaatggtccagacacatatcctgggtgtaatgggattattatg
attgatggcaacagacgatccatgatgatcaagcccgagatgagagaaaagtttgcgaag
gaactgcggattggagagattgttgaaagacatttagaagatggggatattgtgctcttc
aaccgacagccgtcactccatcgaatctcaattatgtgtcacattgctaaggtcttaccg
tggagaactatgagattcaatgagtgtgtgtgtacgccgtataatgcagatttcgatggc
gatgaaatgaacttgcacgtcccacaaacagaagaagcgcgtgctgaatgtttgatgttg
atgcactctgcaaagaacttacaaacgccaagaacaggacagatgatcattgcagagact
caggatttcttgacagtgtcattcttgttaacggcgaaagactttgttgtgaccgaagaa
gagatgatgctgtggtcatgttggttccacaacgctggtgtcgagatccgattgccgaca
ccggcgtatttgaaaccgaagaagttgtggactggcaaacagttgtacggccttgcgttg
cgaccaaatccgaattttggggtggacatttgtcttgatgcgccaagcaagaattacagt
aaagaggggaaatggatgtgtatgaaagatgggtggatctgcttcaaacatagtcaattg
gtgtgtggacaaatcgacaaagcgattatagggtctgggaacaagagtggactgttccac
ttgatattgcgggactacggacttctcgacagtgcaaagatgatggcgcacatttcgcgc
ttctgtgcgagatttttgggggactacggattctccattgggattagtgacgtcactccg
tcattgtcattaacacgaatgaaagaagagttagttggcgaggggtatgcaaagtgtgat
cagttcattaagagttataatgacgggaaacaagagattcaaccgggttcaacgccagag
caaacacttgaagcgttgctgaactccgagttgtcacaagtcagagaacgagctgggaag
aggtgcattgacgagttgcgatgtgacaattcgccgttggttatggcgctttgtgggagt
aaagggtcggtgattaacatttcgcagatgattgcgtgtgtcgggcaacagactgtgaat
ggaggacgagtttctgatgggttcatatcgaggagtttgccacactttccgttacactcg
agaacgccacaggccaaggggtttgtcaaaaactcgttcttcacggggctcaatgcgacc
gaattctttttccacactatgggtgggagagaaggtcttgtagattctgctgtgaagact
gccgagaccggatatatgcagagaagactgatgaaggcgttggaagacttgcatgtccat
tatgatgggacggttcgaagtgcggggatgacggtgattgagttcaaatatggtgatgat
gggttggaccctttgaaagtcgagtgtgatatcgatcccatcaactacgagtcggtttta
gctaatttacaacaacaccagaagaccgaagacttgtacatcacccccaaaacctttgat
tcttattacaaagaagcgctcaccggtgttcaaatagtcaccgatttgtggaaatcgcaa
cttgatgtgtttatggagaaaaagaagagtgagatgagtgaggtatacactcattactcg
gaaaagagtgtgagggatgggttgtgtggaattactgtcgacacgatgaagaagtttgtc
aaagtgtgcgaacaaaaggggctgagaaatatctgcgaaccggggaccccagtgggcgcc
cttgctggtcagtccatgggtgaaccgtccacacagatggtcttgaaaacgttccacttt
gcgggcgttgcctcgatgaatattgcacttggtgttcctcgtattaaggaaattattaat
gcaagtaagaagatccaaaccccgattgtgacagcaaagcttgtcaactcaaaagatgtg
acttcggctcgtattgtgaaaggaagaattgaagcgaccaaattgaaagaaatagcgaag
tcggtgaagattgtatttaagccggcggaggcgtacgtgtcgatcaaacttgactttgag
acgatcaaacagttgcaacttgaatgtagtgcagagaaagtccacgacattttgttgaac
acgcggggtctcaaattgaaagagaaacaagttttagtgaggaatgttgataagctgcga
gtgtatgttgacaaagtgaacacgtcgctgttgttctcgttgaatgctttaaggaaccaa
cttttggaaatcattgtgtgtgggatagaaggcactgggagagctgtgattaacaagagc
aaaattgggtttgagttgttggtcgaaggcagtgagctgctgaaagtgatgggcgttgct
ggtgttattggagagagtaccacatgcaatcacattatggttgtcgagaaagtgcttggg
attgaagctgcgaggtcgaccattatctcagaaattaagaacgtcatggatgcttatggt
ctatcgattgatatcagacacttgctcttgttgtccgatttgatgacattcaaaggggtc
attcttgggatcacacggtacggcatatcaaaaatgaaagactcggtgtttacattcgct
tcatttgaaagaactaacgaccatttgtttgacgctgcggtgcactcccgacaaaacgac
attgctggtgtttcagagagtatcattgttggaaaccaagtagggttaggtaccggactt
atgtcgattatgtacgacccacccaagcctattgtattctacaagaagtatgacccactc
ttttga
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integrated database retrieval system
