Entamoeba invadens: EIN_408610
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Entry
EIN_408610 CDS
T04133
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EIN_408610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eiv03041
]
EIN_408610
Enzymes [BR:
eiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EIN_408610
Spliceosome [BR:
eiv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EIN_408610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
T2SSE
AAA_19
nSTAND3
Cas3-like_C_2
Flavi_DEAD
YlmH_1st
nSTAND_NTPase5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14884525
NCBI-ProteinID:
XP_004184938
UniProt:
A0A0A1TWN0
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MADTNNKNKESLDEKRIESRQAYLPKREFQKLRELKDEIEDEAEMFQDNELTAKEKEDLQ
QKVEIYNLAKQRIATDQINAPQYVIPTTKGVVEKQNFDTKDDDTEWLETRAKAAVTGKTL
DDRKGDNFNEFEKMLDEENVDDFEQKILQMRAAELDAPSKRTKVDELSEVRKTLPVYKKR
DEFLKLLRSHQIIIIAGETGSGKTTQLPQYLFEEGYCKTGKIAVTQPRRVAAMSVARRVA
EEVGCRLGGLVGYTIRFDDVTSDRTLIQYMTDGMLLRAFLNAPDLKEYSCIMIDEAHERT
VATDILFGLLKDVARFREDLKIIISSATLETQKFSEYFDNAPVFLVPGRRFPVTIEYLKE
PEPDPLLASVLTTLKIHTTMPKGDVLIFLTGQEEVEQCVEMLKERTRGLGTKIDELIITK
IYSALPSDIQAQIFAQTPPNARKVVVATNIAETSLTVDGIVYVIDCGYCKINEYNSRTGM
ESLLVTPISKASADQRAGRAGRVSPGVCYRLYTKEAFIKELPAATPPEIVRSNLSAVILL
LKTLGIDDIVHFDFMDPPSPESMMRALEELYGLGAFNQNGELTLRGRKMAEFPMAPSLAR
VIISAEGFGCTEEIATICAMLQVSGELFYRPKEKAQLADTAKKSFVRGEGDHITLLTVFN
SWIEAGRSDGWCRDNFIQARALNRAEDIRDQIVNLMERVDIQLIKAKDYASIIKSLLSGF
FFNTAQLTKEGVYRQVRQNRTIEIHPSSVLYGKSPRWILFYELVMTTKEYVRQVSEIDPA
WLVEIAPHIFKEADMKEAIRKYRLKKK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcagatactaacaacaaaaataaagaaagtctcgatgaaaaacgtattgagtcaaga
caggcatatctccccaaaagagaatttcagaagttgcgagagttaaaagacgaaattgag
gatgaggcagagatgtttcaagacaacgagttgactgcaaaggaaaaggaagaccttcaa
caaaaagtggaaatctacaatttggcgaagcaacgaattgcaacagaccaaatcaacgca
cctcaatatgtcataccaacaacaaaaggcgtcgtcgaaaagcaaaacttcgacacaaaa
gacgacgacacagaatggcttgaaaccagggcaaaagccgcagtcacgggtaaaacactt
gacgaccgcaaaggtgacaacttcaatgaatttgagaaaatgcttgacgaagaaaatgtt
gacgatttcgaacagaagatcctccaaatgcgagcagccgaacttgacgcgccttccaaa
cgaacgaaggtcgacgagttatctgaagtccggaagactctcccagtttacaaaaagcga
gacgagtttcttaaattactccgttcgcaccagatcatcataattgctggggagacaggt
tctgggaaaacaacacaacttccacaatatttatttgaagaagggtattgtaaaacagga
aaaatagcagtaacacaaccaagacgagtagctgcgatgagtgttgcaagaagagttgcg
gaagaggttggatgccggcttggtggactcgtgggatatactattcgattcgacgacgtc
acttccgaccgaactttgatacaatacatgacggacggaatgttactccgagcgtttttg
aatgcgcccgatttgaaggagtacagctgcattatgattgacgaagcgcacgaaagaaca
gttgcgacggatattctgtttgggcttttaaaagacgtcgcacggtttcgagaagatttg
aagatcatcatttcttctgccaccctcgaaacacagaagttctcggaatactttgacaac
gcgcctgtatttctggtccccggaagacgatttccagtcacaattgaatacttaaaagaa
cctgaaccagacccattactcgcttcagttttaacgacgttgaaaattcatacaacaatg
ccaaagggagatgttctgatattcttgacggggcaggaagaggtcgagcaatgtgtcgag
atgttgaaagagaggacccgcggtcttgggacgaaaatcgacgagttaatcattaccaaa
atatattcggcgttgccaagcgatatccaagcacaaatatttgcgcaaacaccaccaaat
gctcgtaaggtggttgttgctacaaatattgccgaaacatcattaacagttgatgggatt
gtgtatgtcattgattgtgggtattgtaagatcaacgagtataactcacgaacggggatg
gagagtctattagttacaccaattagtaaagcatcagcggaccaaagagctggtcgtgct
ggtcgagtttctcctggagtttgttatagactttacaccaaagaagctttcattaaagaa
cttcctgcagcaaccccaccagaaatcgtccgttcaaatttgtctgctgtgatactgttg
ctcaaaacgcttgggattgacgatatcgtccacttcgatttcatggacccaccaagcccc
gagtcgatgatgagagctttagaggagttatatggattgggcgcgttcaaccaaaatggt
gaattgacgctgcggggtcgaaagatggcggagtttccaatggcgccttctctagcacgt
gtaataatatcagccgagggttttgggtgcactgaggaaatagcaacgatatgtgctatg
cttcaagtatcgggagagttattttatcgtccaaaagagaaagcgcaattggcagacact
gctaaaaagagttttgttcgaggcgaaggtgatcacattacccttttaacagtgtttaac
agttggattgaagcagggagaagtgatgggtggtgtcgagacaattttatacaagcacgg
gcactcaacagagctgaagacattcgagaccaaatcgtgaatttgatggaaagggtcgac
attcaactgatcaaagcaaaagactacgcatcgattattaaatccctcttgagcggattt
tttttcaacacagcacaactcacaaaagaaggtgtttacaggcaagtcagacaaaaccga
acaatagaaatccacccaagttctgtcctctatggaaaatctcctcggtggattcttttt
tatgaactcgtcatgactacaaaagaatacgttcgacaagtttctgaaattgatccggcg
tggcttgttgagatcgcgccacacatatttaaagaggcagacatgaaagaggcaattcga
aaatacagactcaagaaaaaataa
DBGET
integrated database retrieval system
