Entamoeba invadens: EIN_425090
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Entry
EIN_425090 CDS
T04133
Name
(RefSeq) CHD3-type chromatin-remodeling factor PICKLE, putative
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
eiv
Entamoeba invadens
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_425090
03036 Chromosome and associated proteins [BR:
eiv03036
]
EIN_425090
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EIN_425090
Chromosome and associated proteins [BR:
eiv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
EIN_425090
SLIK complex
EIN_425090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
CHD1-like_C
HTH_Hrp3
Chromo_MIT1
AT_hook
Motif
Other DBs
NCBI-GeneID:
14888725
NCBI-ProteinID:
XP_004256558
UniProt:
A0A0A1U5Y6
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MSDAVHPKITKKVTLTDLSDDTSLEMSSSTDEKSLPTVTPPSNPPRKRGRPRKSVSDKVE
KPPMISHAVKNLRKRDLTLCRNVFAEDEEEEEPPKSTYKKKMTKKVITQVSSESSDSSMD
SLETSEDSEDTEEGKYDKTNSDSEALLTLERPRTRMREKRNCEKISFDKEWEKNYKVPKK
KKVTTPTKAYSPVPVAPNTIDKVLNYRKRSDKKDIGLKELATFNFEKEAEFEVKWGDMSY
RHNTWVTLETSKDMKGYLKLKNYIKTIRLNGEMYANSTAEEIEAYNIELESQQALVESYK
RVERIVSVYLDEGKTYFVKWVGLQYGECSWESEGDLTLPEDKEAIRQFYEREQETLTKKA
EKLKRRFIKYVDDENAKLKLRDYQIEGVNWLTYAFSKNVNVILADEMGLGKTIQTITFLR
HLYDKCNYVGPHLVVVPLSTINNWAKEFAKWAPRMNCIVYTGDGESRAIIRKTEMESTSK
KPKFNVLLTTFELVIKDQGLLNLYHWGYLAVDEAHRLKNAEGQLYEALLNLHTECKLLIT
GTPLQNTLKELWSLLHFLHPEQFPNFEDFEKTHKVNAAEELQKFHSELKPYILRRMKKEV
EKSLPPKKERILRVGLSGLQKQYYRWIITKNESALKKAVKQQKMSLMNIMIELKKLCNHP
LLINQSISYDEQGLIESCGKMVLLDKLLVELKKDGHRVLIFSQMVRMLDILAEYMKKRGF
SYQRLDGSMGKEPRQRAMEQFNAKDSRDFCFLLSTRAGGLGINLTSADTVIIYDSDWNPQ
NDLQAQARCHRIGQEKMVNIYRLVTEGSVEEKILMSAKKKMVLDHLVIQTMEKKKKNGKE
SFEKDEIDRIIKFGAANIFGKDEGEQKKVDLEEIMKRGDEREEKSEDDEDELLGAFNVEN
FAIGDGKSFWDKVIQEEDEKEAKRLDYEILGIEEKKEAKDEKSDRKRKVEKEDRIDEKIV
KSVLKGMKRFGFHRREEVVKCVKRSMKKDNVALEEIVNNLCERISASCDSLDGDGHIRDI
ERYVEGVKFSPFELKQKNEEMKMVGILIKYMDKHNDKLPFELKTPQWSVEIDWKAEFDGL
IVRGIKTFGLGMWSDMGREDEGVQKVIAAGATPMHIQRRAEIILKETKELVRRKMARDEK
RKRTTGIAKSEQLKDGNDINSVSSVITVSKLTSEKPIQKVKDINNEHEKRIERVEQKLEN
EKKKETHSEKAQTSVKMEEESETDDGFSVVIHTCDEWLVGYDKLQCLSKLEKVKDCLKKL
RYLKTHPDIEAKLAVRKLDRYLGIIKEEIDKYEDEEKTYKQLWYYVSTFTNMSMDEVLEA
SCVIRKRKEGGVPDIKNPKMELK
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccgttcacccaaaaataacaaaaaaagtgacgttgacggacttgagcgac
gacacatcactcgagatgtcctcttccacggacgagaagtctcttcccaccgtcactcca
ccatccaatcctcccagaaagcgtggacggccacgaaagagtgtctccgacaaagtcgag
aagcctccgatgatttctcatgcagtgaaaaatttacggaagcgcgacttaacgctttgt
cgcaatgtgtttgctgaagacgaagaagaagaagaaccaccgaagagtacttataagaag
aaaatgacaaagaaagtcatcactcaagtctccagtgaatcgtcggactcttcaatggac
tcgttggagacttcagaagactcagaagataccgaagaaggaaagtacgacaagaccaat
tcagacagtgaagcgctcttaacattagagcgcccgcggacacgaatgcgcgagaagcgc
aattgtgagaagatcagttttgataaggagtgggaaaagaactataaagtgccgaagaag
aagaaagtgacgacaccgacaaaggcgtacagtcctgttcctgttgctccgaacaccatt
gacaaagtgttgaattaccggaagagaagtgacaagaaggacattggattgaaggagctg
gcgaccttcaattttgagaaagaggcggaatttgaagtgaaatggggagacatgtcatat
cgccacaacacgtgggtgacgttggagacatcgaaagacatgaaggggtacttgaaatta
aagaactatattaaaactatacgattgaatggggagatgtatgccaattccacagccgaa
gagatcgaagcgtataatatcgaattggagagtcaacaagccttggtggagagttataag
cgtgttgaacggattgtctcggtgtatcttgacgagggcaaaacgtattttgtgaagtgg
gttggtctccaatatggggagtgttcctgggagtctgaaggggatttaacattaccggaa
gacaaagaagctattcgccagttttatgagagagagcaagagacgttgacgaagaaggca
gagaagttaaagcggaggtttattaaatatgttgatgacgagaacgcaaaattgaagtta
cgtgattaccaaattgaaggcgtgaattggctgacatatgccttttctaaaaacgtgaat
gtcatcttagctgatgagatggggttggggaagacgatacaaaccatcacattccttcgc
catttgtacgacaagtgcaattacgtcggcccccatttggtcgtcgttccgttgtcgacg
attaacaattgggcaaaggaatttgcgaaatgggcgccacgcatgaattgtattgtatac
acgggagacggcgagagcagagcaatcattcgaaagacagagatggagagtactagtaag
aaaccgaagtttaacgtgttattaacgacctttgaattagtgatcaaagaccaagggtta
ctgaatttgtatcactgggggtacttagccgttgatgaagctcaccgactgaaaaatgcg
gaaggtcagttgtatgaggcgttactgaatttacacacggagtgtaaactccttatcaca
ggaacaccacttcaaaacacgttgaaggagctttggagtttacttcacttcctacacccc
gaacaatttccaaattttgaggactttgagaagacgcataaagtcaatgcagcagaagaa
ttacagaaattccatagtgaattgaagccatacatcttgcgacgtatgaagaaggaggtg
gagaagagtttaccgccgaagaaggagcgaatacttcgagtagggttgagtgggttacag
aagcagtattaccgatggatcataacgaagaatgagagtgctttgaagaaagctgttaaa
caacagaagatgtcgttgatgaatatcatgatcgagttgaagaagttgtgtaaccatcct
ttgttgatcaaccaatcgatctcttatgatgaacaagggttaattgagtcatgtgggaag
atggtgttacttgacaagttacttgtggagttaaagaaagacgggcatcgagttttaatc
ttcagtcagatggtgaggatgttagacatcttagcggagtatatgaagaagcgagggttt
tcgtatcaacgcctcgatgggtcgatggggaaagaacctcgacaacgcgcgatggagcag
ttcaatgcaaaagactcgcgcgacttctgtttcttgttatcgacgcgcgctggaggactt
gggatcaatttgacgagtgcggacacggtgatcatctatgacagtgattggaacccacag
aacgatttacaagcgcaagcgcgatgtcatcgtatcggacaagagaagatggtgaacatc
tatcgtcttgtgacggaaggaagtgtagaagagaagatccttatgagtgcaaagaagaag
atggtacttgaccatttagtgatacaaacgatggagaagaagaagaagaatgggaaggag
tcctttgagaaggacgagattgaccgcatcatcaaatttggagcggcaaatatctttggg
aaagatgaaggggagcagaagaaggtggacttggaagaaataatgaagcgtggggacgaa
cgagaagagaagtctgaggatgacgaggatgagttgcttggcgcgtttaatgtggagaat
tttgcgattggcgatgggaagagtttctgggataaagtcattcaagaggaagacgagaag
gaggcgaagcgacttgattatgaaatacttggcattgaagagaagaaagaagccaaagac
gagaagagtgaccggaagaggaaagttgagaaagaggatcgaatagacgagaagatagtg
aagagtgtgttaaaagggatgaagcgatttgggtttcatcggcgggaggaggttgtgaag
tgtgtgaagcggagtatgaaaaaggacaatgtagctttagaagagattgtgaacaatttg
tgtgagagaattagtgcatcgtgcgacagtttagatggcgacggacatattcgggacatc
gaacgatacgtcgaaggcgtcaaattttcgccatttgagttgaaacagaaaaacgaagaa
atgaagatggtggggatcctcataaagtacatggacaaacacaacgacaaactcccattt
gaactgaagaccccgcaatggtcagtggagattgattggaaggctgaatttgatggactg
attgtgagaggaatcaagacgtttggcttagggatgtggagtgatatgggaagggaagat
gaaggcgttcagaaggttattgcagctggtgcgacaccgatgcatattcaacgaagagcg
gaaatcatcttgaaagagacgaaggaattagtgaggaggaaaatggcgagagatgagaag
agaaagcggaccactggtatagcgaagagtgaacagttgaaagacggcaatgacattaat
agtgtgtcgagtgtcattacagtgagtaaattaacaagtgagaaaccaattcaaaaggtc
aaagatatcaataatgaacatgagaagagaattgaacgagtcgaacagaagcttgagaat
gagaagaagaaagaaacacactctgaaaaagcacaaacgagtgtcaaaatggaagaggag
agtgagactgatgatggattcagtgttgtgatacacacctgtgatgaatggttagttggg
tatgacaaattgcaatgtctgagtaaattggagaaagtcaaagattgtcttaaaaagctc
aggtacttaaaaacacacccagacatcgaggctaagcttgctgtgagaaagttggataga
taccttggaatcattaaagaggaaatagataagtatgaagacgaagagaaaacttataag
cagttgtggtactatgtctctactttcactaatatgtcgatggatgaggtcctcgaagca
tcgtgcgtcatcagaaaaagaaaggaagggggtgtccctgacataaagaacccaaagatg
gagttgaagtga
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integrated database retrieval system
