Entamoeba invadens: EIN_486830
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Entry
EIN_486830 CDS
T04133
Name
(RefSeq) histone deacetylase Rpd3, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03082
ATP-dependent chromatin remodeling
eiv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EIN_486830
03083 Polycomb repressive complex
EIN_486830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eiv03036
]
EIN_486830
Enzymes [BR:
eiv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EIN_486830
Chromosome and associated proteins [BR:
eiv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EIN_486830
HDAC complexes
Sin3A-HDAC complex
EIN_486830
BRAF-HDAC complex
EIN_486830
REST complex
EIN_486830
SHIP complex
EIN_486830
MiDAC complex
EIN_486830
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EIN_486830
Heterochromatin formation proteins
Other heterochromatin formation proteins
EIN_486830
Chromatin remodeling factors
NuRD complex
EIN_486830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
14888100
NCBI-ProteinID:
XP_004255992
UniProt:
A0A0A1U4Q3
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MTRVFYFYDHNVGEFDYGFGHPMKPLRNKLVHHLIMSYGVYQRLNIYKPWRATNEQLEMF
HSKEYIEFLQRVTPSKALLPYFRRSLEEFNFTVDDCPVFDGLYPFVQTVVGSTIGCAMKI
NERAADVCINWSGGLHHAKKSQASGFCYINDIVCGIMELLKVHSRVLYIDIDHHHGDGVE
EAFKATNRVMTISLHKYGDNYFPGTGDVDEVGVEEGKNYSINVPLKDGINDESYHKLYMP
IIDRAMEVFQPGAVVMQCGADSLNGDRLGFFNLSIQGHCACMTHVKKFGVPMILVGGGGY
TVSNTARCWCYETAAACDLSIPDQIPINDYLEYYVPDMRITIPTSAQMKNCNSRNYCEDI
LGKVLSVLDEVGNSNLPIMQFVNPPRRDEHTVDMEIDEDAETYQDACEGFKRDIPMNMDN
EDVVKFFTEPLPIYPKSKLFCTESDLKTME
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagtgttctacttctatgaccacaacgttggagagtttgactacgggtttgga
catccgatgaaaccccttcgaaataagttggtgcaccatttgatcatgtcatatggtgtc
tatcaaagactgaacatctacaaaccttggagagctacaaatgaacaactcgagatgttc
cattcaaaggaatatatcgagtttcttcagagagtcaccccaagtaaggcactgttgcct
tacttcagaagatcgttggaagaattcaacttcactgtcgatgactgccccgtctttgat
ggcctgtacccgtttgtccaaacggtagttgggagcacgattgggtgtgcgatgaaaatc
aacgagcgtgctgcggatgtatgcatcaattggtcaggtgggcttcatcatgcgaagaag
tcgcaagcgtctgggttttgttacatcaatgacatagtctgtgggataatggaactgtta
aaagtgcattctcgtgtgttgtacattgatatcgaccatcatcatggtgatggtgttgaa
gaagcgttcaaagcgacgaatcgagtgatgacgatctctcttcacaaatatggagacaat
tattttccagggacgggtgatgtcgatgaggttggggtagaagaggggaagaattattcc
atcaatgtcccattaaaggatgggatcaatgatgaaagttatcataaattatatatgcct
atcatagatcgtgctatggaagtctttcaaccgggtgccgtcgttatgcaatgtggggct
gattctttgaatggtgatcggctcggcttctttaatctaagtatacaaggacactgcgcc
tgtatgactcatgtcaagaaattcggtgtccctatgatccttgtgggcgggggtgggtat
actgttagtaacaccgcaaggtgctggtgctatgagacagccgcagcttgtgacttgagt
atccccgatcagatcccaatcaacgactatctcgaatactacgtgccagacatgcgaatc
acgatacccacaagcgcacaaatgaagaattgtaactcgcgtaattattgtgaagacata
cttgggaaggtgttgagtgtacttgatgaggttggtaactcgaatttgccgatcatgcag
tttgtgaaccccccacgacgtgatgaacacaccgtggatatggaaatagacgaggacgca
gaaacatatcaagacgcttgtgagggattcaaaagagacatcccaatgaatatggataac
gaggatgtggttaagttcttcacagagccgttaccaatatacccaaagtcaaagctcttc
tgcacagaaagcgacttgaaaactatggaatga
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