Entamoeba invadens: EIN_492390
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Entry
EIN_492390 CDS
T04133
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2, putative
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03020
RNA polymerase
eiv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIN_492390
09124 Replication and repair
03420 Nucleotide excision repair
EIN_492390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_492390
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_492390
Enzymes [BR:
eiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIN_492390
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EIN_492390
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EIN_492390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
14887941
NCBI-ProteinID:
XP_004255761
UniProt:
A0A0A1U496
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MQDNFENDITDEAGRVKPQWFWYLIEEHFRENGLVKQQLSSFNNFVKRVQDIVKTDTFKF
EVNNSDTLRVNPADEESHTLEFDETKYRYPQIKTSPNSNVKEKIFPHEARIRGLTYASEL
KINVKDTIYRGGKLVDEKTSDFFDLASIPAMLKSKICRLVSIVKLNDIIQSDECQFEQGG
YFVVKGSEKVVIAQEKMSPNTVLVFEGSDMAKYPFEGNINSLAMNDEVRSHKIRMDFPKN
QEMNKDLKVKVPMLTMSRMMCDVPLVLLFVALGYETDEKIVDAICFDEKDNEMYNIVTTA
IQANEYTTVEKAREWIGRNSKRSNKEGDEIVTENIEKMRRDGTSKLKTDLLPHIGVDNFE
SKAYFLGYMTNHFLSVYTGKRNGDDRDHLARKRMLMTGGLMMELFKNALKKLTKYARNKI
QDIVSHKKSDNIDYGKVYNSKIITDDCKKALSTGNWPQPGGKEARHGVAQVLNRITFTSA
LAYLRKISSPVEGKRKTQKPRQLHNTQWGYICPAETPEGEQCGLVKMLSLMAQITVALPL
QNVQEIKDQLNSQYCKDISECLGHNMNTTTKVFLNGSWLKCTDEPQKLLDDLKQYRKNSE
KGKVKKVMSMVLDQLHRELRIYTDAGRCTRPLFTVSNNNGELGINLQKEQIKQLCIEMGR
NDENGQKKKLWANFLTKGIIEYVDADEEEMSMIAMFPSDLLNRGSGPAVNYTHCEINPAL
IMGILGSIIPFPDHNQSPRNTYQCAMGKQAIGVYASNYQLRMDSLGHVLFYPQKPLVSTK
GADYAKFGEIPAGINAVVAVCVYSGYNQEDSVMMNQGSIDRGLFRSMCFKTFLKDYKKGE
ETDLMFFRPCEGTDLKDVSKYQHLDVDGVAPPGTKVRADDVIIGAFYKGKSGELKDCSMR
YKPRENGVVDQVVVATTENRAKMIKIKMRSIRIPQIGDKFSSRHGQKGTVGMTYRQEDMP
FNIEGINPDIIMNPHAIPSRMTVGQLVECLLGKVGALVGDVQNGTPFQPGLTVDVISDRL
HKLKYQRWGYEALFSGHTGRKLDTLVYMGPTYYQRLKHLVDDKVHGRATGPYATLTRQPL
EGRSRDGGLRLGEMERDCMISHGMSALLRERLFLASDRYQVYVCDKCHMPAVANQRSSTF
ECSCCKDRTHISKVEIPYAAKLLFQELMSMAICPRIYAEM
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaatttcgaaaatgacatcactgatgaggccgggcgcgtgaagccgcagtgg
ttctggtacctcatcgaagagcatttcagagaaaacggtcttgtcaagcaacaactttcc
tcattcaacaactttgttaagcgagtccaggacatagtcaaaacagacaccttcaagttc
gaagtgaacaactccgacaccctccgtgtcaaccccgcagacgaagagtcacacaccctt
gagtttgacgaaacaaagtacaggtatccacaaattaaaacttctccaaattcaaacgtc
aaagaaaagatcttcccacacgaggcaagaatcagaggattgacctacgccagtgaactt
aaaattaatgtcaaggataccatctacagaggaggaaaactcgtggatgaaaagacgtcc
gatttctttgatcttgcgagcatcccggctatgcttaagtcgaagatttgccgtcttgtg
agtattgttaaactgaatgatatcattcaatctgatgagtgccaatttgaacagggtggt
tactttgtggtgaaggggagtgaaaaggtcgttattgctcaagagaagatgtctccaaac
actgtgcttgtttttgaaggaagtgatatggcgaagtacccatttgaaggaaatatcaat
tctttggccatgaacgatgaagttagaagtcacaaaatcagaatggactttcccaaaaat
caggagatgaacaaggatttgaaagtgaaagttccaatgcttacgatgtcaagaatgatg
tgtgatgtccctcttgtgttgctctttgtcgcacttggttatgaaacagatgaaaagatt
gtcgacgctatttgttttgacgaaaaagataacgagatgtacaacattgtcacgacagcc
atccaggccaacgaatacacaactgttgaaaaggcgagagagtggataggtagaaactcg
aaaaggtcgaacaaagaaggcgatgagatagtcactgaaaacattgagaagatgagaaga
gacggaacctcaaaattgaaaactgaccttctgccacatattggagttgacaacttcgaa
tcaaaagcgtacttcttgggatacatgacgaatcactttttgagtgtgtacactggaaaa
agaaatggcgatgatagagatcatttggcaagaaagagaatgcttatgactggcggcttg
atgatggagcttttcaaaaacgcactgaagaagctcaccaagtacgcaagaaacaaaatc
caggacattgtttcccacaagaaatccgacaacattgactatggtaaagtgtacaattca
aagatcataactgacgactgcaaaaaagctctttcaacgggaaattggccacaaccagga
ggaaaagaggcacgacatggtgttgcacaggttctcaacagaatcacattcacgtctgcg
ttggcttatttgagaaagatttcgtcaccagttgaaggtaaacgaaagacccagaaacca
agacagttgcacaatacccaatgggggtacatttgcccagcagaaacaccagaaggagag
caatgtgggttggtcaaaatgctcagtttgatggcgcaaattactgtcgcgcttccattg
caaaacgtccaagaaattaaagaccaactcaattcacagtattgcaaggatatcagtgaa
tgccttgggcataacatgaacaccacaacgaaggtcttcttgaatggatcgtggttgaaa
tgcactgatgaaccacaaaaattgcttgacgacctgaaacaataccgaaagaacagtgaa
aagggtaaagtcaagaaagtgatgtccatggtgctggaccagttgcacagagagttgcgt
atttacaccgacgcgggaaggtgtacaagaccacttttcaccgtgagtaacaataacgga
gaactggggattaatctgcagaaagaacaaatcaaacagctttgtattgagatgggtcgt
aacgacgaaaacggacagaaaaagaagctttgggccaactttcttaccaagggtatcatc
gagtatgtcgacgccgatgaagaagagatgtccatgattgcgatgttcccaagcgatttg
ttgaacagaggctctggtcctgctgtcaattacacgcattgtgagatcaacccagcattg
atcatgggtatccttggaagtattatcccattccctgaccataatcagtctccaagaaat
acataccaatgcgctatgggtaagcaagcgattggagtgtatgcttccaactaccagttg
cgaatggactctttgggacacgtcttgttctacccacaaaagccccttgtgtcgacaaag
ggtgccgattatgcgaagtttggagaaattccggcgggtattaatgcggttgttgctgtc
tgcgtctattctggatataaccaggaagactctgtcatgatgaaccaaggcagtattgac
agaggactctttagatccatgtgcttcaaaacgttcttaaaggattacaaaaagggagag
gagaccgaccttatgttctttagaccgtgtgagggaacggatctgaaggacgtttctaaa
taccaacacttggatgtcgatggtgtggctcctcctggcacaaaggtcagagcagacgat
gtcataatcggtgctttttacaaaggaaagtcgggtgagttgaaggattgttcaatgcga
tacaaaccaagagaaaacggtgttgtcgaccaagtcgttgtggcgacgacagagaacaga
gcgaagatgatcaagatcaaaatgaggagtatccgtattccacaaataggagacaagttc
agttcaagacacggacagaaaggtactgtgggtatgacttacagacaagaggatatgcct
tttaacattgagggtattaatcccgacattatcatgaatcctcatgctattccatctcgt
atgactgttgggcaacttgtcgagtgtttacttggtaaggtcggagcactggttggtgat
gtgcagaacggcacgccgttccaacctggtttgactgtcgacgtgataagcgacaggtta
cataaattgaagtaccagagatggggatatgaggcgttgttctctgggcacaccggaaga
aagttggacactttggtatacatgggcccaacatactaccagagattgaaacatttggtt
gatgacaaggttcacggcagagcgactggcccttacgcgacgttgacaagacagccactt
gaaggaagatcaagagacggtgggttaagacttggggagatggagagagactgtatgatt
tcacatggtatgagtgcgttgttgagagaaagactgtttttggcctcagataggtaccag
gtgtatgtctgcgataagtgccacatgcccgctgttgcaaatcagcgctcttcaacattt
gagtgttcgtgttgtaaagaccgaacgcacatatcgaaagtggagattccatatgccgcg
aagctcttattccaggaactcatgtcaatggcgatatgtccaagaatctacgccgagatg
tga
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integrated database retrieval system
