Embiotoca jacksoni (black perch): 138191850
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Entry
138191850 CDS
T10523
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138191850 (hnf1a)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
138191850 (hnf1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
138191850
NCBI-ProteinID:
XP_068994999
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MEGEERAGAAKVRSSCLTALQEQLIWALLESGLSRDVLVQAMGELERNRTSGGAEKAERG
DGESSEEGEMDFPPPIFRDLEKLPPDEASKLRAEVDQLLQEDSWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKRCEISQQFTNAKHGLASMEE
HGEETKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREVLVEECNRAECIQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTSQSASSSHPGLPPSPEHGVKYSQ
QISCETMSSARGSAGDRVGRLVVSPVQLEPSHTLLETHNPKPVSSGGPLPPVSTLTSLHS
LSASPASSQSLIMASVPGVMSFGESSLLIGLTSTQPQTVPVINNMGGGFTTLQPISFQQQ
LHASSQQPLSHQLHSHMAASPFMATMAQLPCHMYNKSDSPQYHPSSLLSQAMVITDSSSL
GTLTSLAAVRQILTADPEEETDPPLQEESLHLQPHTPVPASSESLELYPASQTTESHQSH
LLSPSPTDISSYIPSQMVSTAQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagagggccggggctgccaaagtgaggtcgagttgtctgaccgcgctt
caggagcagctgatctgggccctgctggaatcaggactatcccgggacgtcctggtccaa
gccatgggggagctggagcgaaacaggacgagtggcggcgctgagaaggcagagagggga
gatggagagagctccgaggagggagaaatggatttcccaccacctatattccgagacctg
gagaagcttcctccggacgaggcatccaaactgagggctgaagtcgaccagttactgcag
gaggactcctggcatgttgcaaaaatggtgaaaagctacatgcaacagcataacctccct
cagcgagaggtggtggagtccacagggctcaaccagtcccacctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaagagagctgctctgtacacctggtacgtcaagaag
cggtgcgagatcagccagcaattcaccaatgccaaacatggccttgcatctatggaggag
cacggagaggaaacaaagaaaggacggaggaacaggttcaagtggggtccagcatccctg
cagatcctcttccacgcctacgaaagacagaagaaccccagcaaagaggagcgagaggtg
ttggtggaggagtgtaacagggcagagtgtatccagaggggcgtgtctccctcccagctc
gctggtctgggctccaacctggtcaccgaggtccgagtatacaactggttcgccaaccgc
cgtaaagaggaggcctttcgtcacaagctggccctcgacacacctttcaccagccaatct
gcgtcctcttctcatcccggccttcctcccagtcctgagcacggtgtgaaatacagccag
caaatctcatgtgaaactatgagctcagctcgaggcagcgcaggagacagagtgggacgt
ctcgtggtcagtccggtccaactggagcccagccacacactcctcgagacccataacccc
aagccggtgtccagcggtggcccactacccccagtaagcactctgacctccctgcacagt
ctgtctgcctcccctgcatcctcccagagcctcatcatggcctcagtgcccggcgtcatg
agtttcggggagtcctctcttctcatcggtttgacctccacgcagcctcagaccgtgccc
gtcataaacaacatgggcggcggcttcacaactctgcagcccatctcgttccagcagcag
cttcacgcctcatcacagcagcccttatctcatcagcttcacagtcacatggctgccagt
ccgttcatggcaaccatggcgcagctgccatgtcacatgtacaacaagtcggactcgccc
cagtaccacccgtccagtctgctgtctcaagccatggtcatcactgacagcagcagcctg
ggaactctgaccagcctcgctgccgtcagacagattctgacagcagatcccgaggaagag
acggacccacctttacaggaagagtctctacacctgcagccgcacacacctgtgccagct
tcttctgagagcctcgagctgtatcctgcctctcagacgacagaaagtcaccagtctcac
ctcctctcaccttcaccaacagacatcagctcctacatcccttcacaaatggtctctacg
gcacagtaa
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