Embiotoca jacksoni (black perch): 138191981
Help
Entry
138191981 CDS
T10523
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03030
DNA replication
eja03410
Base excision repair
eja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138191981 (pole)
03410 Base excision repair
138191981 (pole)
03420 Nucleotide excision repair
138191981 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eja03032
]
138191981 (pole)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138191981 (pole)
Enzymes [BR:
eja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
138191981 (pole)
DNA replication proteins [BR:
eja03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
138191981 (pole)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
138191981 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
138191981
NCBI-ProteinID:
XP_068995203
LinkDB
All DBs
Position
Unknown
AA seq
2293 aa
AA seq
DB search
MVLQNSGRYKFNRGQSGGDQENQDDGSSMSALKRLERSQFTDEMDTRFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYLATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDVYTSMLSSALSGGNVTSADEDGMLKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGNAYLPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMMSYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNVF
VTYNGDFFDWPFVETRAALHGLSMYREIGFQKDGQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEV
CDEIKNKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSATVDEATCAACDFNKP
GASCQRRMAWQWRGEIMPAGRSEFHRIQQQLESEKFPSLFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SSAQDSGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPASLMYNIRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELVSENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKTPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVARQP
LEAGQADDIEDFGVPARPLQPAILICTKRKRASQGVDSQVESQDVELTQSWREILGPPPP
KGNTREERLVWLRYHKKKWELQMRQRKERKKRRRLLDGEAQPIGGRVVRDGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNMVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKYVMRDLAGREADTFDLEHLDMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLSNLYAAERTALLEKTTEELLPPEKHLFEVRAEN
DMKAISRALQRILLNYKEERRGPTLIALQSNWELRRLAAGMPVLEEFPVVPVHVVDEINY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGISFDVIQQASLEEMMSGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLHSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRTDDAIGYVDYITNSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSVLYGEEGAKRKKTRRGEGDEDGSEDEDEDDVEENDGDEETDEVEELI
ESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGVSQASQQ
AVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTETSEMFPILPGSHLP
LNNPALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPCNSYILPEV
ICHHCNFCRDLDLCKDPSVAQDGSVMPQWFCPNCQAQYETDSIEMALVEALQKKLMSYTL
QDLVCTKCKGVKEANMPLYCRCAGDFDLTFLEKSFSEQITVFRNIASHYNMSFLEETIDW
LLVMNPQISQSAH
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagtggacggtacaaatttaaccggggacaaagtggaggagatcag
gaaaaccaggacgatggctcctcgatgtcggccctcaagcggctggagcgcagccagttc
accgacgagatggacacccgcttcgggttcgacaggatgaaggagcccggggagaaaaca
ggctggctgatcaacatgcaccctacagagatcctggatgatgacaagcggatgatcagt
gctgtggattattatttcatacaggaggatgggagcaggttcaaggtggctctccccttc
aagccatatttttaccttgctactaaaaagaactgtgagagagaagtcatctcatacttg
tctaagaagttccaaggaaaagtggcaaagcttgaaattctcccaaaagaggacctggac
ctgccgaaccatctcgtcggactgaagagaagctacatcaaattgtcattcaacaccgtg
gacgacctcgtcaaggtcaagcgagagatctctcccgccgtacgcaagaacagagaaagg
gaacagtccaatgacgtctacacctcaatgttatcgagcgccttatcagggggcaacgtg
acctcagcagatgaagatgggatgttgaagagtatttcagatcagttagacaacattgtg
gacatgagagagtatgatgtgccttaccacgtgcgcctgtccatcgacctcaagatccat
gtggcccactggtacaacgttcgatacagaggcaacgcttacctaccagagattgtgcga
agagacgacctcgtggagcgaccggacccggttgttttggcttttgacatcgagaccacc
aaacttcccctgaaattcccagacgcagagaccgatcagattatgatgatgtcctacatg
atagatggacaggggttcctaatcacaaacagagagatcgtctctgagaacattgaggat
tttgagttcactcccaaacctgaatatgaagggcctttcactgtttttaatgaggatgat
gaggcagccctcattcaaaggtggtttgatcacgttcaagaaaccaagccaaacgtcttt
gtaacctacaatggagacttcttcgattggccgtttgttgaaactcgagctgcccttcat
ggactgagcatgtacagggagatcggtttccagaaggacggccagggagagtacaagtcc
agtcaagccatccacatggactgcttaaggtgggtaaagagggacagctacttgccggtg
ggaagtcacaatctgaaggcagcagcaaaggccaagttgggctacgacccagtggagctg
gacccagaggaaatgtgccgcatggcaactgaggagccgcagactttagcgacctactct
gtgtcagatgctgttgccacatattacctgtacatgaaatatgttcaccccttcatcttc
gctctgtgcaccatcatccccatggagcccgatgaggtgctgcgtaaaggctctgggact
ctgtgtgaagccttactcatggtgcaggccttccacgccaacatcgtcttccccaacaag
caggagcaggtcttcaacaagctgacggacgacggccacgttatggactctgagacctac
gtaggcggccacgtggaggcactggagtctggagtgtttcgcagtgacatcccgtgccga
ttcaaaatgaacccggctgcatttgacttcctgctgcaaagagttgagagaacgatgcgt
cacgccatcgaggaggaggagaaaatccctttggagcaagtcaccaacttcaatgaggtc
tgcgatgaaatcaaaaacaagctgacttccctgaaggaggttccaaacaggatcgaatgc
cccctcatctaccatctggatgtcggggcgatgtaccccaatatcattctcaccaaccgt
ctgcagccatccgctacagttgatgaggccacgtgtgctgcctgtgactttaacaagccc
ggtgcgtcctgccagaggaggatggcctggcaatggagaggcgaaatcatgcctgcgggc
cgcagtgagttccaccgcatccagcagcaacttgagtcggagaagttcccgtcgctgttc
cccaacggtccacctcgggcctttcacacactcaacagggaagagcaggccaaacacgag
aagaaacggctggcagactactgtaagaaggcctacaagaagacgcacgttacccggctg
gaggagcgagttaccaccatctgtcagagagaaaactccttctatgtcgacacagtcaga
gcttttagagatcgacgttatgaattcaaaggtcttcacaaggtgtggaagaagaaacta
tcatcagctcaggacagcggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgactctcttcagctggctcacaagtgcatcctcaactctttctacggctacgtt
atgaggaaaggggcccgctggtactccatggagatggctggcattgtgtgctacactggc
gccaacattatcactcaggccagagagctcatcgaacaaatagggaggcccctcgagttg
gacactgatggtatctggtgtgtcctacccaacaccttccctgagaactttgtggtaaag
accagtaatgagaagaagcccaaggtgaccatctcctacccaggggccatgctgaacatc
atggtgaaggagggattcaccaacgatcagtaccacgagctggtcgaccccgcgtccctc
atgtacaacatcagggcggagaacagcatcttcttcgaggtggacgggccgtacctggca
atgatcctgcctgcctcgaaagaggaaggcaagaagctgaagaagaggtacgctgtgttt
aatgaggacggctctctggccgagctgaagggttttgaagtgaaaagaagaggagagctc
cagctcattaagattttccagtcatctgtgtttgaggcttttctcaaaggtaccactctg
gaggaggtgtacgcgtctgtggccaaagtggcagactactggctggatgtgctttacagc
aaggctgccaacatgccagacgcggagctgttcgaactggtttcagagaatcgttcaatg
tccagaaagcttgaggactacggagagcagaagtctacgtctatcagcacagctaagaga
ctggcagagttcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaacctgagggttcccctgtcacagaaagggccattcctctggccatcttc
caggcagagcctagtgtgaagaaacatttccttcgtaagtggctgaagacgcccagcctg
catgacttggacatccgctctatccttgattggagctattacatagagaggttgggaagt
gcaatccagaaaatcatcaccatccctgctgctctgcaacaggtgaagaatcctgttccc
agagtgaggcatcccgactggcttcataagaagctcttggagaagaatgatatctacaag
cagaagaaaattagcgagctatttaccagtgagggcaagagacaggtggcccgtcagcct
cttgaagcaggccaagctgatgacatagaggactttggggtgccagccagacccctgcag
ccggccatcctcatctgcaccaagcggaagcgcgcttcacagggagtcgacagccaggtg
gagtctcaggacgtcgagctcacacagtcctggagagagatcctgggaccacccccacct
aagggaaacacacgggaggagcgcctagtgtggctgcgttaccataagaaaaagtgggag
ctgcagatgaggcagaggaaggagagaaagaagagaaggaggttgctggacggcgaagct
cagcctatcggtggaagagtggtcagagatggccccaccaccggcctgggaagcttcctc
cgcagaacagcacgcagcatcctagacatgccatggcaaattgtgcagattgcagagact
agtcaccctggtctgtataagttgtgggctgtgattggaaatgatctccactgcatgaaa
ctcaacatcccccgtgtcttctacgtcaatcagaaagtcccaaaacaggaggagggagcc
acgtacaaaaaggtgaaccgcatgctgcctcgctccaacatggtgtactacctttacgag
tactgtgtaccggaggacatgtaccaggagcacatcaacgagatcaacgcagacctctct
gcacccgacattgaaggcgtctatgaaacacaggtccctttgctttttcgtgcactggtg
cagctcggatgtgtgtgtatggtcaataaatatgtcatgagagatctggctggcagggag
gccgacactttcgatctggagcatctggacatgaggtctctggcccagttcagctacctg
gagcctgggagtgttcgccacatgtacttgtatcaccacagtcaaggccacaaggctctg
tttggcctgttcattccctctcagcgcaaagccagcatctttgtcctggacacagttcgg
agcaaccagatgcccaacctgagtaacctctatgcagctgaacgcaccgccctcctggag
aagaccacagaggagctgctgcctccagagaaacacctgttcgaggttcgggctgaaaat
gacatgaaggctatctcccgcgcactgcaacgcattctgctaaactacaaggaggagcgt
cgtgggcccaccctcatcgccttgcagtcgaactgggagttgcggcgattggcagcaggg
atgccagtcctggaggagttcccggttgttccggtacatgtggttgatgagatcaactac
aatgtgctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaacctg
gacagctgcctctcacaagcttttgacatggccaggtattaccacctacctgtggggaac
ttgccccaggatgtgtccatctttggctcagacttattcctggcaagacatctacggaaa
cacaaccacctgctctggctttcacccacagccaggcctgacctcggagggaaagaggct
gatgacagtcgtctggtcatggagagtgatgacaggggctctgtagagatcaatgctcaa
ggatgttattccacagtatgtgtggagctggacttgcagagcctggcagtgaacaccatc
ctccagtcgcagcatgtcaacgacatggagggcggagccagtctgggcatcagttttgat
gtgatccagcaggcctcactggaggagatgatgtcaggaaaccagggtgcaagcgctctc
gctagctacgatgagaccgctctctgctccaacaccttcaggatcttaaagagcatggtg
gttggatgggtcagggagatcacacagtaccacaacgtgtacgcagacaaccaggtgatg
cacttctatcgctggctgcactctccaagctcgttgctctatgaccctgcactgcatcgc
accctgcacaacatgatgaagaaggtgtttctgcagttggttgcagagttcaaacgtctg
ggctccactgtggtgtacggaaactttaacaggatcatcctgtgtactaaaaaacggagg
acagatgatgccatcggctatgtagattacatcactaacagcatacactccagagaaatc
ttccactctttgtccatctccttctcacgatgctgggagttcctgctgtggatggacccg
gccaactatggcggcgtgaagggcaaattgccctccagtgtcttgtatggagaggaagga
gccaaacggaagaaaaccagacgaggggagggagatgaggatggcagtgaggatgaagat
gaagacgatgttgaggaaaatgatggagatgaagagacagatgaagtggaagagttgatt
gagagcaactggaatataatgcagtatcttccccaaaccgcctcctgccagaaatacttc
ctcatgattgtctcagcctacattgcagcggtctaccacagcatgaaagaggagctgaga
cgcaacgctcctggagccacgccagtgaagagacgtggagtcagccaggcttcccagcag
gcagtcggggatttgagtgctcttcctggaatgatctccttctcccaggaatatgtgtcc
agcgagctgacgcaaaactttttcaccatcactcagaagatccagaaaaaagtgactgga
accaggagtgtgactgagacctcagagatgttccccatcctgcctggttcacacctgcca
ctcaacaacccagcactagagtttgtcaaatacgtctgccaggttctttcactcgatgcc
aacatcgtgaatcaggtgaacaagctgaagagagacctcctgcgtcttgtggatgttgga
gagttttcagatgaagcccagttccgggacccttgtaactcatacatcctgccagaagtc
atctgccaccactgcaacttctgtcgtgacctggacctttgcaaagacccatcagtggca
caggatgggtctgtcatgcctcagtggttctgccccaactgccaggcacagtatgagact
gactctattgagatggctctggtagaggctctgcaaaagaaactgatgagctacacactg
caggacctggtgtgcaccaaatgtaaaggagtgaaggaagccaacatgccgctctactgc
agatgtgcgggagactttgacctcactttcttagaaaagagcttctcagagcagatcacg
gtgtttcggaacatagcgtcccactacaacatgagcttcctggaggagaccattgactgg
ctgcttgttatgaatcctcagatcagccagagcgctcactaa
DBGET
integrated database retrieval system
