Embiotoca jacksoni (black perch): 138192011
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Entry
138192011 CDS
T10523
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138192011 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138192011 (smarca2)
03036 Chromosome and associated proteins [BR:
eja03036
]
138192011 (smarca2)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138192011 (smarca2)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138192011 (smarca2)
Chromatin remodeling factors
BAF complex
138192011 (smarca2)
PBAF complex
138192011 (smarca2)
GBAF(ncBAF) complex
138192011 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
138192011
NCBI-ProteinID:
XP_068995252
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNTPHGM
QGQGQSEYSQDGMYTMHKPMEGMNDKTMAEAMHFGHMKGVGMRALHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHIPSSQSGPMISMDPQGGMSSMGQQGRGP
SAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQPAPSASPYNRPPGMPMAPMGGPQSSPCPAPAMQG
HNQSTGPKPWTDGHGGENQANAQKHLTPVPSGRPSPAPPQTSGVSAGPMPGGSAPPQPPG
QQVSPMLQMQKQNRITPIQKPQGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLR
TKATVELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLE
KQQKLEQEKKRRQKHQEYLNSILQHAKDFKEYHRSVSGKVQKLTRAIATWHTNTEREQKK
ETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAA
KEKKRKKKKKKKVDGDGEGTSAYGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKS
SQLEAWLEMNPGYEVAPRSDSEQSSSEFEEEEEDEATKAETEEKKIIDPNGVLVTVKAAK
HIIDSAKQDVDDEYSVAAGQTSSQSYYGVAHAVIERVEKQSSLLINGSLKHYQVQGLEWM
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYELDKW
GPSVVKISYKGTPALRRGLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR
MKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQK
VLYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYP
NGIISGPDLYRASGKFELLDRILPKLHATNHRVLLFCQMTTLMTIMEDYFGYRNFQYLRL
DGTTKAEDRALLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCSVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGQERRVF
LQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTYEDEEEKLFGRGSRCRRDVDYGDTLTEKQWLRAIEDGNLEE
MEEEIRLKKRKRKRRQDKDSSSREDRGAKAKKRRGRPPAEKLSPNPPKVTKQMNTIIDTV
INYRDGAGRQLSEVFVQLPSRKELPEYYELIKKPVDFKKIKERVRSHKYRNMGDLEKDVM
LLCQNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKDEESDDDSDEDDDDDDDESEAEAK
SVRVKIKLSREARALDKGKKRQSRGKAKPVVSDDDSDDDQDDNDQSDKSKSDDE
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcggacacatcaggtggtatgtcccatcctggcccctctcctggggca
ggtctgtccccagggccgatcttgggccccagccctgggccagatccctcaccaagctct
gttcacagcatgatgggtcccagccccggaccaggaacacccaacacacctcatggcatg
cagggccagggacaaagtgaatactctcaggatggcatgtacacaatgcacaagcccatg
gagggaatgaatgacaagacgatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgagagctctccatagtggcatggggcctcctcagagtcctatggaccagcacagc
caaggatacatgtccccccacccttcccccatgggagtccatgagcatgcttctagtcca
atgtcaggtggtggaggtggacctacacccccccacattccttcgtcccagtcaggccct
atgatatctatggatccccaaggaggcatgtccagcatgggccagcagggacggggacct
tccgcatttagtccggtccagctgcagcagctcagagctcagattctggcctacaagatc
ctgggccgtgggcagccgctgcctgaaaacctccagctggctgtacagggcaaaaggagc
ctacccacaatgcaacaacagcaacaacagcaacaacagcaacaacaacagcagcagcag
cagcagcagcaacaacaacaacaacaacaacaacaacagcagcagcagcaacagcagcag
cagcagcagcaacagcagccggcccctagtgctagtccttataacaggcctccaggtatg
ccaatggcacctatgggtggcccccaatcaagtccctgccccgccccggccatgcaagga
cacaatcaaagcacaggacccaaaccttggaccgatggtcatggtggtgaaaaccaagcc
aatgcacagaagcacctcacccctgttccaagcggtcgcccgtcgcctgcgccgcctcag
acctccggcgtgtcggccgggcccatgcccggcggttcagccccgcctcagcctcccggg
cagcaggtgtccccgatgctccagatgcagaagcagaaccgcatcacgccgatccagaag
ccccagggcttggacccggtggggattctgcaggagagagagtacagactgcaggctcgg
attgcacatcgaatccaggaactggagagtctgccgggctccctgcctcctgacctcagg
actaaagccacagtggagctcaaggctctgcgtcttcttaacttccagcggcagctgagg
caggacgtggtggcctgtatgaggcgcgacacgaccctggagacggccctcaattcgaag
gcctacaggcgcagcaagcggcagacgctgagggaggcccgcatgacggagaagctggag
aagcagcagaagctcgagcaggagaagaagcgaagacagaagcatcaggaatatctcaac
agcatccttcaacatgcgaaagacttcaaagagtatcatcgctcagtgtctgggaaagtc
cagaaactcaccagagccatcgccacctggcacaccaacacagagcgggagcagaagaag
gagacggagagaattgagaaggagaggatgaggagacttatggcagaagatgaagaaggc
taccggaaactaattgaccaaaagaaagacaagcgtctggcctacctgctgcagcagacg
gatgagtacgtggccaacctcaccaccctggtgtatgaacacaaagctgctcaagctgcc
aaggagaagaagaggaagaagaagaaaaagaagaaggtagatggagacggtgaaggcacc
agtgcctatggacccgatggagagcccatggatgagagcagccagatgagtgagctgcca
gtcaaagtgattcagacagagactggcaaagttttgcagggaacagatgctcccaaatcc
agccagttggaggcgtggctcgagatgaaccctgggtatgaagtcgccccgcggtcagac
agcgagcagagcagctccgagtttgaggaggaggaggaagacgaggcgaccaaggccgaa
acagaggagaagaagataatcgatcccaatggagttttagtgactgtcaaagctgccaag
cacatcattgattcagccaagcaggatgtggatgatgagtacagtgttgctgctggccaa
accagctcccagtcgtactacggtgtggctcatgctgtcatcgagagggtggagaagcag
tcgtcactgctgatcaatggctcactcaaacattaccaggtccaggggctggagtggatg
gtgtccctgtataataacaatctaaacggcatcctggctgatgaaatggggctcggcaaa
accatccaaaccatcgccctcatcacctacctgatggagtacaagaggctcaatggtccc
tatctcatcatcgtccccctctcgactttgtcgaactgggtctacgagctggataaatgg
ggaccctctgtggtcaaaatttcatacaagggcacccccgctctgcgtcgtgggcttgtg
cctcagctccgcagcgggaagttcaatgtcttgctgaccacctatgaatacatcatcaaa
gacaagcacatactagccaagatccgctggaagtacatgattgtggatgaaggtcaccgc
atgaagaaccaccactgcaagttgacccaggtgttgaacacccattatgtggccccccgg
cgcctcctcctcaccggtactccactgcagaacaagctgcccgagctgtgggccctgctc
aacttcctcctgcccaccatcttcaagagctgcagcaccttcgaacagtggttcaacgca
cccttcgccatgacaggagagagggtcgacctaaatgaggaggagaccatcctcattatc
cgccgtctgcataaagtgctccgccctttcctgctacgcagactgaagaaagaggtggag
tctcagctgcccgagaaggtggagtatgtcataaaatgtgacatgtctgccatccaaaag
gttttgtaccgccacatgcagaaaggcatcctcctcactgatggctcggagaaagacaaa
aagggcaaaggaggagcgaagaccttgatgaacaccatcatgcagctgaagaagatctgc
aaccatccttacatgttccagcacattgaggaatctttcgctgagcacttgggctatcca
aacggcatcatcagtgggcccgatctgtatcgagcttctgggaagtttgagctcctagat
cgcatcctgccaaagctgcacgccaccaaccacagagtcctgctgttctgccagatgacg
actctcatgacaatcatggaggactacttcggctatcgcaactttcaatatctacgtctt
gacgggaccaccaaggctgaggaccgagcgttactgttgaagaagtttaatgaggaagga
tcccagtacttcatcttccttctcagtaccagagccggaggtcttggcctcaacctgcag
gctgccgacacggtcgtcatctttgacagtgactggaaccctcaccaggacctccaggct
caggatcgggctcaccgcatcggtcagcagaatgaggtccgagtgcttcgtctctgcagc
gtcaacagtgtagaggagaaaatcttggcagctgccaaatacaagctaaacgtggatcag
aaggtcatccaggccggcatgtttgaccagaagtcctcaggccaggagcgccgtgtcttc
ctccaggccatcttggagcacgaggagcagaatgaggaggaagatgaggtacctgatgat
gaaactcttaaccagatgatagcccgcaatgaagatgaatttgagctcttcatgcgcatg
gacatggaccgacgccgggaggacgccaggaacccgaagcgtaagcctcgtctgatggag
gaggacgagctgccttcttggatcatcaaagatgacgcagaggtggaacggctcacctat
gaagatgaggaggagaagttgttcggccgaggatcgcgctgccgtcgggatgtggactac
ggtgacacactgactgaaaaacagtggctacgggccattgaggatggaaacttggaagag
atggaggaggagatccggctgaaaaagcgcaaacgcaagagacgtcaggataaggactcg
tcgagcagagaggacagaggcgccaaggccaagaagagacgtggacgaccgccagcggag
aaactctcgcccaacccgcccaaagtcaccaagcaaatgaacaccatcatcgatacagtg
atcaactacagagacggggcaggaagacaactcagcgaggtctttgttcagcttccatcc
agaaaggaactcccagaatattatgagctgatcaaaaaacctgtggacttcaagaagatc
aaggagcgtgtgagaagccacaaatacagaaacatgggagatctggagaaggatgtgatg
ctgctctgtcagaatgcgcagacctttaacctggagggatcccagatatacgaggactcc
attgttcttcagtcggtattcaagagtgccagacagaaaattgccaaggacgaagagagt
gacgatgacagtgatgaggatgatgacgacgacgacgatgagtcagaggccgaggccaag
tcggtgcgggtcaagatcaagctgagcagagaggcacgcgctctcgacaaaggcaagaag
aggcagagccgagggaaagccaagccggtggtcagcgacgacgacagcgacgacgaccag
gatgataacgatcagtcggacaaaagcaaaagtgacgacgagtga
DBGET
integrated database retrieval system
