Embiotoca jacksoni (black perch): 138192160
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Entry
138192160 CDS
T10523
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138192160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138192160
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138192160
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138192160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
138192160
NCBI-ProteinID:
XP_068995500
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MFGANRKKFMEGGLESDYADESSLYYSQQSMFPPHRADKDMLASSSASSTGQLSQLGASL
YGPQSALGFPMRGMNSSAAPQLSRSGLNQSAGQLSSHTSTPNTGTMHTPPSPSRGILPMS
SRSVMNHSQQVGGPTGQAGGIGGGGERGGGGGGGGRSGSMGSPSRSSPSIIGMPKQQQSR
QPFTINSMSGFGVNRNPGYNMNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDGGS
NPTPLLNPLAGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTNDDSKTN
LNSSGKPTSNSDGPKFPGDKSSAPSNNNQQKKGIQVLSDGRVTNIPIGMVTDQFGMIGLL
TFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEY
LTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITR
APGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggagggaggcctagagagcgactacgcggac
gagtccagcctctactacagccagcagtccatgttccctcctcaccgcgctgacaaagac
atgctggcgtcttcctcggcctcctccacgggtcaactatcacagctcggagccagttta
tatggcccgcagagtgcgttggggtttcccatgcgcggcatgaacagcagcgcggcgcct
cagttaagtcgaagcggtctgaaccagtctgcgggtcagctctccagtcataccagtaca
cccaacactggaacaatgcacacgcctccgtcaccgagcagagggatcctccccatgagc
agccgcagcgtgatgaaccacagccagcaggtcggggggccgacggggcaggcggggggg
ataggaggaggaggagaaagggggggaggaggaggaggaggagggaggagcggcagcatg
gggagtcccagccggtcgtcaccgagcatcatcgggatgccgaaacagcagcagtcgagg
cagccgttcaccatcaacagtatgtcggggttcggggtgaacaggaatcccggctacaac
atgaacaactcgctctccaacaacatcttcaacggcacagacggcagtgagaacgtgacg
gggttggacctctccgacttccccgcgttggccgaccggagtcggagggacggcggctcc
aatcccaccccgctgctcaacccgctggccggtcgggctccctacgttggcatggtaacc
aagccgtccagtgagcagtcgcaggacttctccatccacaacgaagacttcccagctctc
cccgggccgaactaccaaacgaaagatcccaccagcaccaacgacgacagcaaaacgaat
ctgaactcatcaggaaagcccacctccaactcagatggtccaaagttccccggcgataag
agctccgcccctagcaacaacaaccagcagaagaaagggatccaggtgctttctgacggg
cgtgtgaccaacatccccatcggcatggtaacagaccagtttggaatgattggcctgctg
acgttcatccgggcggcggagacggaccccggcatggtgcacctggcgctgggctctgac
ctcaccacactcggcctcaacctcaactcacccgagaatctgtaccctaagttcgcatct
ccgtgggcgtcggctccgtgtcgaccgcaggacatcgacttccacgtcccctcagagtat
ttaaccaacatccacataagggacaagttagcggcgatcaaactgtctcgatacggagaa
gatcttctgttttatctctactacatgaacggaggagacctactacaactgttggctgca
gtagagctcttcaacagggactggcggtaccacaaagaggagcgggtctggatcacccga
gctccggggatggagcccacgctgaagaccaacgcctacgagagagggacctactacttc
ttcgactgcctcaactggaggaaggtggcaaaggagtttcatctggagtatgacaaacta
gaagagcgacctcacgttcccaccaccttcaactacaatcctgcccagcaggccttctga
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