Embiotoca jacksoni (black perch): 138192177
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Entry
138192177 CDS
T10523
Symbol
shank3b
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
eja Embiotoca jacksoni (black perch)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_3
SAM_2
PDZ_6
Ank_5
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
138192177
NCBI-ProteinID:
XP_068995521
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDADDTPPGNSIVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRVYTQSYVDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHD
SDTGECPLTLAVQLEESCELIKALRSGGAHLDFRTRDGITALHRAVLCRNSSALTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGMMDENGWQEIHQACRFGNVQH
LEHLLFYGADMSSQNASGNTALHLCALYNQDSCARVLLFRGANKDIKNYNNQTAFQVAII
AGNFELAEIIKIHKTSDVVVPFRETPSYTKRRRAGVSRSSAGNGLSSPRSLIRSASDNAL
ESPASSPGPSLQSLETHHDTHTHSLRRHPRRLSPSAGGHVEASPPSSPPPTPQMRKRRLY
SAVPGRTFIATRSHVPQGAGEIQLHRGERVKVLSIGEGGFWEGNVKGRTGWFPADCVEEV
QMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKTAVLQKRESEGFGFVLRG
AKAETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGTDVVKVGHRQVVS
LIRQGGSRLLMKVVSVSRKSESNLIRKKAPPPPKRAPSTSLTLRSKSMTADLEDIARRRR
FEKLDEMLAGQQEVVLRARPSDDFRAATVKQRPTSRRITQAEINSLFERQGLVPPSAPEK
STMALPRGMSRTKSFGTPDDDRITALINESRFPRSSSLTDSFIPPPPQTAPPPPPSPLFL
LDSGPPPSFLPPPPPARGEGLTRSSFKPGAEPRLQELSDSPARSHAHAERQRKARSMIIL
QDTPPTLQPDGHAGATHTLHTATHTSTLSLHSTSPALGHSPLSRRRGRPIENPYANVGQQ
PPPSKPQRRKSPLLKQLPVEEQGLGIKEHDPNKLDVGSPSRAELYQQQVLSERARVQGRR
SSLFLSVEGAGSDNQALPLLTQSHSMDDLGELPPPAPVLSPSPTPHTFLHPLTGKPLDPS
SPLALALAARERALTARTPSPEPRSKHASASTTPIPTPAASPEGRHKRTPLTTPQSSPEP
RSKRTTPQTSPEQRTKRTTPQTSPEMRHKRITPPLFPDGQVERPETEGGVTSPAGPSPER
WRPSPLPPLGTESHAALLDRRRSLTVGSSEEEGGAYTVTLPPALLSSSDEETREELRRIG
LVTPPPGFSTSTGPPPPSPLALLPRRSGEGGGVESGPESLGRRGDEEEGGDERLHDSSSS
PSSLPPSITLASPPAPPSPSSPPATHPSPSSGVTSPSGLKPRLRSPIGRGRSALRDPLLK
QSSDSELLPSSSSPSSPLCSSPTSGGGRQPRYLFQRRSKLWGGGDEERRGLSPEEGGGRP
AALGGQGSGSAVDLTNRSVSALELSGRAGSGLDLANRLQLLNKDSHSLGEEPSPLDPGRR
SPVGGARCVDSGESKSLFSSLGELHTISQRGYGASYRVRPGSRYPVTRRSPSPSPSPSDR
STGPSSTAPCSERPDLSSGRGLTILKSSSLSLPSEPKEVRFVMRSASARTRSRSPSPSPH
ASPCPSPVLSGPLLALRPWRQRPLNLWNKYDVGDWLESVGLAEHRQRFQEHEIEGSHLPA
LTKEDYVELGVTRLGHRINIERALRQMLEGST
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccgacaggctctgctgttgccagggacgacgacgcggatgacacgccccct
ggaaacagcatcgtcgtccgcatcggcatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcgcctgctgaaggagtatcctctcccccccatcactcccatt
ccgtacctggagtttcgttataagcggagagtttacacgcagagctacgtggacgacaaa
cagctggcaaagctgcacacaaaggcaaacctgaagcgcttcatggaacatgttcaccag
aagaatgtggagaaggtctccaaatggctggagaaaggactggaccccaacttccacgac
tccgacaccggagagtgtcctctgacgctggccgtgcagctggaggagagctgcgagctg
atcaaggcgctccggagcggcggcgctcacctggacttcaggacccgggacgggatcacg
gctctgcaccgggccgtcctctgcaggaacagcagcgccctcacgactctgctggacctc
ggagcgtctccggactacaaggacagccgaggactcacgccgctctaccactcggccatg
gtgggtggcgccccctactgctgcgagctgctgctgcaggaccacgccaccatcgggatg
atggatgagaacgggtggcaggaaatccaccaggcttgtcgctttggtaacgtgcagcac
ttggagcacctgctgttctacggtgccgacatgagttcccagaatgcatcaggaaatacc
gcactacacctctgcgctctctacaaccaggacagctgcgcccgcgtgctgctgttcaga
ggagccaacaaggacatcaagaactacaacaaccagacggccttccaggtggcaatcatc
gctgggaacttcgaactggcagaaatcattaaaatccacaaaacgtctgacgttgtagtt
cccttcagagaaactccgtcctacacgaagcgccgtcgtgccggcgtgtcgaggtcgtcg
gcgggaaacggcctgtcgtctccgcgctccctgattcgctcggccagcgacaacgctctg
gaaagccccgcctcctcgcccggcccctccctccaaagcctggagacgcaccacgacacg
cacacgcactcgctgcgacgacacccgcgccgcctcagcccgagcgccggaggtcacgtg
gaggccagccccccctcctcccctccacccaccccgcagatgaggaagaggaggctctac
agcgccgtcccgggacgcaccttcatcgccacccggtcccacgtcccccagggcgccgga
gagatccagctgcaccgaggggagagggtcaaagtgctgtccatcggcgagggaggattc
tgggaaggaaacgtgaaaggcagaaccggctggtttcctgccgactgcgtggaggaagtc
cagatgaggcagtacgacccgcgactcgagacgagagaggaccgaaccaagagactgttc
agacactacactgtgggttcctatgacaactacacctcctacagcgactacgtgatcgag
gagaagacggccgtgctgcagaagagggagagcgagggattcgggttcgtcctccgagga
gccaaagctgagacgcccatcgaggagttcgcccccaccccggcgtttcccgccctgcag
tacctggagtctgtcgaccaggggggcgtggcctggagggcgggacttagaaccggagac
ttcctcatagaggtgaacggcaccgacgtggtgaaggtgggtcatcggcaggtcgtctct
ctgatccgacagggaggaagtcgcctgctgatgaaagtcgtgtcagtttccagaaaatcg
gaatccaacctgatcaggaaaaaagctccgccccctccaaaacgagcccccagcacctcg
ctgacactccgatccaagtccatgaccgccgacctggaggatatagcccggaggcgacgt
ttcgagaaactggacgagatgttggcgggtcaacaggaagtcgttctgagggctcggccg
tcggacgacttcagggcggcgacggtgaaacagagaccgaccagccgacgcatcacacag
gccgagattaactcgttgtttgagcgtcagggtttggtgccgccttcggctccagagaag
agcaccatggctttacccagagggatgtcccgaaccaagagttttggcactccggacgac
gacaggatcacggctctgatcaacgagagtcggtttccgcggagctcctcgctaacggac
agcttcatccctcctcctcctcagacagccccgccccctcctccctcccccctcttcctc
ctcgactccggcccgcccccctccttcctcccccctccgcctccggctcgcggggagggg
ctgacccgttccagtttcaagccgggggcggagcccaggctgcaggagctctccgattcg
ccagcgaggagccacgcccacgccgagcggcagcggaaagcgaggtcgatgatcatcctg
caggacacgcccccgacgctgcagcccgacgggcacgccggcgccacgcacacgctgcac
accgccacgcacacctccacgctgtctctccacagcactagccccgccctcggccactcg
ccgctgtcacgccgccggggacgaccaatagaaaacccgtacgctaacgtgggacaacag
cctccgccctccaaacctcaaaggaggaagtcacctctgttgaaacaacttcctgttgag
gagcagggtcttggaatcaaagaacacgatccaaataagctggacgtgggcagccccagc
agggcggagctctaccagcagcaggtcctttcggagcgcgctcgtgttcagggccgccgg
tcgtctctcttcctgtctgtggagggggcggggtcggacaaccaggcgctgcctctcctg
actcagagccattcgatggacgacctcggcgagcttccgcctccggccccggtcctgtcg
ccttcaccgacgcctcacaccttcctccacccgctgaccgggaaacctctagacccttcg
tctccactcgccctggctcttgctgcaagagaacgagcgctcactgcccgcacgccgagc
cccgagccgcgaagtaaacacgcctcggcctccaccacgcccatccccaccccggctgcc
agtcccgagggcagacacaagcgcactcccctgaccaccccgcagagcagccccgagcct
cgatccaagcgcaccactcctcagacgagccccgagcagcggaccaagcgcaccactccc
caaaccagtcctgagatgaggcacaaacgcatcaccccgcccctgttccctgatggacag
gtggagcgtccggaaacggagggtggagtgacatcacctgccggcccctcccccgagcgt
tggagaccctcccccttgccacctctgggcactgagagccatgctgctctgcttgacagg
cgcagaagcctcacagtgggcagctcagaggaggagggcggggcttacacagtgacactc
ccacctgccttgttatcgtccagcgatgaggaaactagggaggagctgcgcagaattggt
ctggtgactcctccccccggcttttccacctctacaggccctcctccgccatcccccctc
gctttgttgccacggcgaagtggggagggagggggagtagagagtggccctgaatcccta
ggtagacgaggcgatgaggaggaaggtggtgatgaacgtctccacgacagctcctcctcc
ccaagctccctccctccctccatcaccctagcttcccctcctgctcctccctccccctcc
tccccaccagcgactcatccgtctccctcatctggcgtcacctccccatcgggcctgaag
ccccgccttcgttcaccgatcggtcgcggccgttctgccctgcgggacccgctactgaag
caatcgtcggacagcgagctcctcccctcttcgtcttctccctcctccccactttgctcc
tcccccacaagtggcggcgggcggcagccacgctatctgttccagaggaggtccaagctg
tgggggggcggggacgaggagaggcggggcctcagcccggaggaagggggaggccgtccg
gccgcactgggaggacagggatcgggttcggccgtggatctgaccaaccggtccgtgtcc
gcgctggagctgagcggcagggcggggtcaggactggatctggccaatcggctacagctg
ctcaacaaagacagtcactctctgggggaggagccaagccctctcgacccaggtcggagg
tcaccagtaggaggggccagatgtgtggacagtggagagagtaaatcgttgttctccagc
ctcggtgaacttcacaccatctctcagagaggatacggcgccagctacagggtccgaccg
ggaagtcgctaccccgtcacacgccggagcccctccccttctccctcgccctccgacagg
tcaacggggccctcctccaccgccccctgctccgagaggccggacctgagctcgggtcgc
ggcctcaccatcctgaagtcgtccagtctcagccttccctccgaacccaaggaggtccgg
tttgtgatgcgaagcgccagcgcgcgaacccgatcccgctccccgtcgccttcgccccac
gcctccccctgcccctcccccgtcctcagcgggcccctgctggccctccggccgtggagg
cagcggcccctcaacctgtggaacaagtacgacgtgggcgactggctggagagcgtcggc
ctggccgaacaccgccagcgcttccaggagcacgagatcgaaggctcccatctgcccgcc
ctcaccaaggaggactacgtggagctcggcgtcaccagactgggacaccgcatcaacatc
gagagggcgctcagacagatgctggaaggttccacttga
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integrated database retrieval system
