KEGG   Embiotoca jacksoni (black perch): 138192366
Entry
138192366         CDS       T10523                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    138192366 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eja03019]
    138192366 (exosc1)
Messenger RNA biogenesis [BR:eja03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     138192366 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     138192366 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 138192366
NCBI-ProteinID: XP_068995824
LinkDB
Position
Unknown
AA seq 194 aa
MSPMKLCVPGDKLCSREDCIPGTGVYMRHGYIFSSLAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPLTHTKE
FRKVARVQPEFLQA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgacaaactatgcagtagagaagactgtata
cctggaacaggtgtgtacatgaggcacggatacatcttctcctcactggcaggctacgtg
ctcaggaagaacgagggagaggagttgccggtgatctcggtggtgagggaaacagaaaca
cagctgctgccagatgtcggagcgatagtcacctgtaaggtgacgagcatcaatcctcgg
ttcgccaaagtccacatcctgtacgtgggctccacgccgctgaaggaccgcttcagaggc
accatcagaaaagaagacgtgcgtgcgacagagaaggacaaggtggaaacgtataaaagc
ttcagaccaggcgacatcgtcttggcaaaagttatttctctcggagacgttcagtccaac
tacctgctgacgacggcggagaacgagctgggcgtggtggtggcccacagtgaagcaggt
gcccagatggttccgatcagctggtgtgagatgcagtgtcctctaacacacaccaaagag
ttccgtaaagtggcgcgagtgcagccggagtttctccaagcatga

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