Embiotoca jacksoni (black perch): 138192366
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Entry
138192366 CDS
T10523
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138192366 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138192366 (exosc1)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138192366 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138192366 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
138192366
NCBI-ProteinID:
XP_068995824
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSREDCIPGTGVYMRHGYIFSSLAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPLTHTKE
FRKVARVQPEFLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaaactatgcagtagagaagactgtata
cctggaacaggtgtgtacatgaggcacggatacatcttctcctcactggcaggctacgtg
ctcaggaagaacgagggagaggagttgccggtgatctcggtggtgagggaaacagaaaca
cagctgctgccagatgtcggagcgatagtcacctgtaaggtgacgagcatcaatcctcgg
ttcgccaaagtccacatcctgtacgtgggctccacgccgctgaaggaccgcttcagaggc
accatcagaaaagaagacgtgcgtgcgacagagaaggacaaggtggaaacgtataaaagc
ttcagaccaggcgacatcgtcttggcaaaagttatttctctcggagacgttcagtccaac
tacctgctgacgacggcggagaacgagctgggcgtggtggtggcccacagtgaagcaggt
gcccagatggttccgatcagctggtgtgagatgcagtgtcctctaacacacaccaaagag
ttccgtaaagtggcgcgagtgcagccggagtttctccaagcatga
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