Embiotoca jacksoni (black perch): 138192458
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Entry
138192458 CDS
T10523
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04510
Focal adhesion
eja04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138192458 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138192458 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
EGF_LMN_ATRN
Laminin_N
LAMB1
DUF3887
Motif
Other DBs
NCBI-GeneID:
138192458
NCBI-ProteinID:
XP_068995956
LinkDB
All DBs
Position
Unknown
AA seq
1912 aa
AA seq
DB search
MQCRQTHNSSTIFTVHQDLTSKPLKLPTTSWLKVQTDVLVEVYFVTRVRTCSRVIRLNYV
KSIELPNNDERVVKQILPPSFGTTFCARNETARSPLSNRGDGGSVTCSSFMVTFDPPSAP
CPSGGEEMLRVQLPGDVRRQQQPGQPHRRERGHHLRPQPAEDLVAVGERCGERDPAAGPG
GRVSFHTPNHDLQDVSPGSHDHRALDGLRENVAGLSLLRLRLQVVLPRRLHRADGQSGRH
HLRLPLLGHRTVHRGRGQGAFVFSKKKTFTKMFGFHHFCVFQVIFRVLDPAFNIEDPYSL
RIQNMLKITDLRVKFIKLHTLGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAP
MDRAPTGAEGMVHGRCVCNHNTEGLNCERCQDFYQELPWKPAEGRNTHSCKKCECNHHSA
SCHFDLAVYLTTGNMSGGVCDGCRHNTVGRQCEQCAPFFFQHPNRDLRDPNVCEPCNCDP
SGSLQGGLCDSRTDVAAGLISGQCRCKANVEGERCDHCRQGHHGLGQGPHGCLACTCNPL
GTLPGGNSCDSETGSCFCKRLVDGQNCDQCLPQHWGLSHDMDGCRPCDCDQGGAVNNNCD
SLSGQCACRERMFGRRCDQVESGFYFISLDHYTYEAEDAEHGPGVKVVPRPYPAGRSPTW
TGVGFANVPEGAYLEFNVDNIPESMEYDVLIRYEPQLPEQWEKVNIRVRRPVFNPPNYSA
HCSNSFQGEDEQSISLPPGSRHVLLVRPVCFEKGLNYTVRLSLPLYSSGSGVQSPYTLLD
SLVLMPRVRELDMFHGVEGEGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHK
GAMACQCDPQGSLSAVCDSSGGQCRCRANVVGRNCDHCGPATFLFSPSGCRPCDCDPRGA
VSAFCHEATGQCECVSGATGRQCAQCLPGYWGFPQCRQCHCNGHSEYCNPQTGECQGCRD
FTTGHQCERYDLLMKTMMKTMMMSEIITFRSGSDRERDRRFEATDSSPGIYFKYPLFPFT
HRCLDGYHGDPELGSGGHCRPCMCPDGPRSGRQFADSCYLLSNTNQLVCVCSPGYKGARC
DSCSPGYYGNPLVPGGRCTACQCNNNIDMHDPGSCDTRTGACLKCLYHTQGHVCQHCKLG
YYGNAATQSCRKCMCSSEGTLPQACSSPDDCQCEQRGGQCPCQPNVVGQNCDRCANDTWN
IASRTGCQRCDCDPVHSLRSSCHEVTGRCVCKPGFGGRTCRECKELFWGDPEVKCHACNC
DSRGISSEQCHHATGQCTCVEGVSGPRCDKCARGYRGEFPACERCHECVAVWDAVVGELT
NQTRRLEAQVTELLTSGVTAPYKELVGSLETNAKAVREIVEKNPAAVQLEQIQDLTHQIT
GLMSFLNGKLNTTEETLNLLQDDANATDANLDALTDESDRLERTVRELRQQVHDTKNANI
HGAMGTIAAAHMQSRNAELLAKASTSDPGNTVELSAAVRKSTEDRLSGGQKEFDRKHQRN
TQKLDKLSKDLEKSDLSPLSEKTCGGGAAEGDDCSPCGGLGCVGEDGAPRCGGEGCRGLV
TASRTALKSANNLDREILAAMQEVDKLSRMVWEANTRANEAKMNALEVLVKSNRSKERVE
QSNEQLRSLIKEIRDLLTNEKADVSVIEAVANEVLALEMPVSTEKLQELTKEIREKVGTL
TSVESILSQSAEDIEAAEALLKQAKAANDEASNMKDTADVVKEALEETERAQSIAMDAIQ
LAQNNTKGTLDLLISVESETAMSELKLGNTTGRMVQLEREVGLLRQNSLEVTRLAETADR
FTDQARLNAEEAQQEFDEEVKDKLEVVEEQVEDKGESVLQARRRADELQIEANELLAQSS
TKLQRLGELESSYEANQRVLEAKAAELDELERTARRILDEISYKVTLYSTCL
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcagacagacacacaacagcagtacgatattcactgtacatcaggatttgacc
tcaaaacctctgaaactaccaactacttcgtggctaaaagttcaaactgacgttcttgtt
gaggtttatttcgtgacgcgggtgaggacttgttctcgtgtcattcgcctgaattacgtt
aaatccatcgaactgccaaataatgacgaacgagtcgtgaaacagattcttcctccttca
ttcgggacgactttctgtgccagaaatgagacggctcgcagcccgttgagtaaccggggt
gacggcgggagtgtaacgtgttcgagtttcatggtgacctttgaccctccgagcgctccc
tgtccctcaggaggagaagaaatgcttcgcgtgcaactcccgggagatgtacgacgacaa
cagcaaccaggtcagccacaccgtcgagaacgtggtcaccaccttcgcccacaaccggct
gaagacctggtggcagtcggagaacggtgtggagaacgtgaccctgcagctggacctgga
ggccgagtttcatttcacacacctaatcatgaccttcaagacgtttcgcccggcagccat
gatcatcgagcgctcgatggacttcgggaaaacgtggcaggtttatcgttacttcgcctt
cgactgcaagttgtccttccccggcgtctccaccgggccgatggtcaaagtggacgacat
catctgcgactcccgctactcggacatcgaaccgtccaccgagggagaggtcagggcgca
tttgttttttctaaaaagaaaacttttacgaaaatgtttggttttcaccatttttgtgtc
tttcaggtgatatttcgggtgctggatccggctttcaacatcgaggacccctacagtctg
aggatacagaacatgctgaagatcaccgacctgcgagtgaagttcatcaagctccacacg
ctcggcgacaacctgctcgactcccgcgacgaggtcacggagaagtactactacgccctc
tacgacatggtcgtccgcggcaactgcttctgctacggccacgcctccgagtgcgccccg
atggacagggcgccgacgggagccgagggcatggtccacggccgctgtgtgtgcaatcac
aacaccgagggactgaactgcgagcgctgtcaggacttttaccaggagttgccgtggaaa
cccgcagagggacgaaacacgcactcctgcaagaagtgcgagtgcaaccatcactcggcg
tcgtgccacttcgacctggccgtgtacctgacgacgggcaacatgagcggcggcgtgtgc
gacggctgccggcacaacacggtgggccggcagtgcgagcagtgcgctccgttcttcttc
cagcaccccaacagagacctgcgggaccccaacgtctgcgaaccgtgcaactgcgacccg
tccggctccctgcagggcggactgtgcgactcgcggaccgacgtggccgccgggctgatc
tcgggccagtgtcggtgcaaagccaacgtggagggcgagcgctgcgaccactgcagacag
ggacaccacggactgggacaagggccgcacggctgcttggcttgtacctgcaacccgctg
ggaacgctgcccggaggaaactcctgtgattcagaaacaggaagttgcttctgcaagcgg
ctcgtcgacggacagaactgcgatcagtgtctgccgcagcactggggtctgtcccacgac
atggacggctgcaggccgtgtgactgcgatcagggcggggccgtcaacaacaactgcgac
tctctctcgggacagtgcgcgtgccgggagcgaatgttcggccggcgctgcgatcaggtc
gagtcgggcttctacttcatctctctggatcactacacgtacgaggccgaggatgccgag
cacggaccgggggtgaaggtggtgccgaggccgtatccggcgggtcgcagtcccacctgg
accggcgtgggcttcgccaacgtgccggaaggagcctacctggagttcaacgtcgacaac
atcccggagtccatggagtacgacgtcctgattcgctacgagccgcagctccctgagcag
tgggagaaggtgaacatccgagtgcggcgtcccgtcttcaaccctccaaactactcggct
cactgcagcaactccttccagggcgaagacgagcagtccatctctctcccacctggatcc
aggcacgtgctgctggtgaggccggtgtgtttcgagaaaggactgaactacacggtccgt
ctcagtctgccgctctactcgtccggcagcggcgtccagagcccgtacacactcctcgac
tccctggtgctaatgccccgggtcagagagctggacatgttccacggggtcgagggcgag
ggagcgtgggacacgttccagcgctaccgatgtctggagagcagccagagcgtcgtcaaa
agcccgctgacggacatctgcaacgactacatcttcagcgtctccgctctgctgcacaaa
ggagccatggcgtgccagtgtgaccctcagggttcgctcagcgccgtctgcgattcgagc
ggcggtcagtgtcggtgtcgagccaacgtcgtgggcaggaactgcgaccactgcggtccg
gcgacgttcctgttcagcccctccggctgcagaccttgcgactgcgacccgcgcggcgcc
gtcagcgccttctgccacgaggcgaccggccagtgcgagtgcgtttccggggcgacgggc
cgccagtgcgcccagtgcctgccgggctactggggcttccctcagtgccggcagtgccac
tgcaacggccacagcgagtactgcaaccctcagaccggagagtgtcagggctgcagggac
ttcaccaccgggcaccagtgcgagaggtacgacctgctgatgaagacgatgatgaagacg
atgatgatgtcagagatcatcacatttagaagcggctcggaccgagagcgtgatcggcga
tttgaggcaacggattcaagtccagggatttactttaaatatcccctttttcccttcact
cacaggtgtctggacggttaccatggcgacccggagctgggttcaggcggccactgtcgc
ccgtgtatgtgtccggacgggccgcgcagtggacggcagttcgcagacagctgttacctt
ctgtccaacaccaaccagctggtgtgtgtgtgcagccccggctacaaaggtgccaggtgt
gacagttgctcccccggttactacggcaaccctctggtgcccggcgggcgctgcacggcc
tgccagtgcaacaacaacatcgacatgcacgacccggggtcctgcgacacccgcacgggc
gcctgcctcaaatgcctgtaccacacgcaaggccacgtctgccagcactgcaaactgggt
tactacggcaacgccgccacgcagagctgcaggaagtgtatgtgttcctcggaggggacg
ctccctcaggcctgctcgtcccccgacgactgtcagtgcgagcagcgcggcggtcagtgt
ccctgccagcccaacgtggtcggtcagaactgcgaccgctgcgccaacgacacgtggaac
atcgccagccggaccggctgccagcgctgcgactgcgaccccgtccactccctcagatct
tcctgccacgaggtcactggacgctgcgtgtgcaaacccggattcggtggccggacgtgt
cgggagtgcaaagagctgttctggggggatccagaggtcaaatgtcacgcttgcaactgc
gactcccgggggatctccagcgagcagtgtcatcacgccacgggacagtgcacctgcgtg
gagggcgtgtcgggccctcggtgcgacaagtgcgcccggggctaccggggcgagttcccc
gcctgcgagcgctgccacgagtgcgtcgccgtctgggacgcggtggtcggcgagctgacc
aatcaaacccgacggctggaggcgcaggtgacggagctcctgaccagcggggtgacggcg
ccatacaaagagctggtcggcagcctggagacaaacgcgaaggccgtcagggagatagtg
gagaagaaccccgcggccgtgcagctggagcagatccaggatctgacgcatcagatcacg
ggtctgatgtccttcctgaacgggaagctgaacacgaccgaggagacgctgaaccttctc
caagacgacgccaacgccaccgatgcaaacctggacgcgctgacggatgagtctgaccgg
ctggagcggaccgtccgggagctccgacagcaggtccacgacaccaagaacgccaacatc
catggcgctatgggcaccatcgccgctgctcacatgcagtctaggaacgcagagctgctc
gccaaggcctccaccagcgaccccggcaacacggtggagctgtcggccgcggtacggaaa
tccacggaggaccgactgagcggcggtcagaaggaattcgaccgaaagcaccaaagaaac
acgcagaagctggacaagctctccaaagatctggagaaatccgacctgtcgccactgagc
gagaagacgtgcggcggcggtgcggctgaaggcgacgactgctccccctgcggcgggctg
ggttgcgtcggcgaggacggagcgcctcggtgcggaggagaaggttgtcgaggcctcgtc
accgcctctcgaacggccctgaaatcagccaacaacctggaccgggagatcctcgccgcc
atgcaggaggtggacaagctctccaggatggtgtgggaagccaacacacgcgccaacgaa
gccaaaatgaacgctttggaggttctggtcaaatccaaccgcagcaaagagcgagtggag
cagagcaacgagcagctgcgcagcctcatcaaggagatccgggacctcctcaccaacgag
aaggcggacgtgtccgtgatcgaggcggtggccaacgaggtgctggcgctggagatgccg
gtctcgacggagaagctgcaggagctgacgaaggagatccgggagaaggtcggcactctg
accagcgtggagtcgatcctcagccagagcgccgaagacatcgaggcggccgaggcgctg
ctgaagcaggcgaaggcggccaacgacgaggcgtccaacatgaaggacacggccgacgtg
gtgaaggaggcgctggaggagaccgagcgcgctcagagcatcgccatggacgccatccag
ctggcgcagaacaacacgaagggaacgctggacctgctgatctcggtggagtcggagacg
gccatgtcggagctgaagctcgggaacacgacgggtcgcatggtgcagctggagagggag
gtcggcctgctgaggcagaacagcctggaggtgacccggctggcggagacggccgaccga
ttcaccgaccaggcccgactgaacgcagaggaggcgcagcaggagtttgacgaggaggtg
aaagataaactggaggtggtggaggagcaggtggaggataaaggggagtcggtgctgcag
gcgaggaggagagcggacgagctgcagatagaagccaacgagctgctcgctcagagcagc
acgaagctgcagagactcggagagttggagagctcctacgaggccaaccagcgcgtcctg
gaggccaaagctgcggagctggacgagctggagcgaaccgcgcgccgcatcctggacgag
atcagctacaaagtgacgctttacagcacctgtctgtga
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