Embiotoca jacksoni (black perch): 138192670
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Entry
138192670 CDS
T10523
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138192670 (ybx1)
03019 Messenger RNA biogenesis [BR:
eja03019
]
138192670 (ybx1)
03041 Spliceosome [BR:
eja03041
]
138192670 (ybx1)
Transcription factors [BR:
eja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
138192670 (ybx1)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
138192670 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
138192670 (ybx1)
Spliceosome [BR:
eja03041
]
Common components
Common spliceosomal components
General mRNP proteins
138192670 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
138192670
NCBI-ProteinID:
XP_068996314
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MSSEAETQQQPPQPAADAESPSSPVAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYA
ADRNRYRRYPRRRGPPRGGDYPENYQSDGEGEAGSGGGRDKSSREGGESAPEGDSQQPRR
PAYPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDESQGGPDQGNKPVRQNYYRGF
RPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRPQTGGKPGQETKEA
KTGGDPSAEKTSAPEAQQGGAE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacagcaaccgccgcagcctgctgccgatgcggaaagc
ccatccagcccggtagccgcagcttccgcgggggataagaaggtcatcgcaacaaaagtc
ttgggtacagtcaaatggttcaacgtcaggaatggatacggttttatcaacaggaatgat
acaaaagaggatgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaatac
cttcgcagtgttggagatggagaaactgtggagtttgatgtagttgagggagagaaggga
gcagaggcggcaaatgtcaccggcccaggaggcgttgctgtccagggaagtaagtacgcc
gctgacaggaaccgctataggcgctacccccgaaggaggggccctccgcgtggaggagac
tacccagagaactaccagagtgacggagagggtgaggcaggcagcggaggaggacgtgac
aaaagcagcagagagggcggagagagcgcccctgaaggagactcgcagcagccacgcaga
cccgcttaccctggcagacggcgctacccgccatactttgtacgtagacgctacggccgt
cggcccccttacaccaacgcaccacgtggagagatgactgagggaggtgagggtgacgag
agccagggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttc
cgaccaaggggtccaccccgtcccagaccggtgcgggacggcgaggaggacaaggagaat
cagggcggcgaaggtggtcaaaatcagcagccccgccagcggcgctaccgccgtaacttc
aactaccgccgcagacgcccacagactggtggcaaacccggccaggaaaccaaggaggcc
aagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccagcagggtggg
gctgagtag
DBGET
integrated database retrieval system
