Embiotoca jacksoni (black perch): 138192944
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Entry
138192944 CDS
T10523
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eja03400
]
138192944 (apex2)
Enzymes [BR:
eja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
138192944 (apex2)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
138192944 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
138192944
NCBI-ProteinID:
XP_068996751
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MEIVTWNINGIRTFGGGIKNALDSLGADIICVQETKVTRDLLDERTAVVEGYNSYFSYSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDHTEFSSEELQLLDSEGRAV
ITQHRIMCQDKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAESVLKDGSHVIVL
GDVNTSHRPIDHCDPSDNDDFSENPGRKWLNGFLHSGREEEDDDDDEPDEESEVTDTIHS
GIFVDTFRFFHPTRTNAFTCWSTLTGARQTNYGTRIDYILADCQLAKEQFVAADIMPEVE
GSDHCPVWGKLSCSLLPSSKAPPLCTRYLPQFAGKQQKLSRFLVKVDQISVQSEQKEVLP
ASQEEEERRENLNPHGAGNVPGKKRLLTSHSVVPKGKKPKTVNTSSKPQGSLLSFFKPKQ
ANVGQCEKETGLDEDASSHSSQKAPSAGEMSSVTDTGNRDTELVLDGSSQLCSGSTTAET
DKRVKTKHLSSQPAVGHSEAKKGASLGFWKSVLRGPPPPPSCKVHGEPCVLRTVKKEGPN
MGKQFFVCARPQGHASNPEARCNFFAWVDKGK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgttacctggaatataaacggcatcaggactttcggaggcggcataaaaaat
gctctcgactccctgggtgcagatattatttgcgttcaggagacgaaagtgacgagagac
ctgctcgatgaaaggaccgcggtagtcgaaggctacaactcctacttcagctacagtcga
gggcgcagcggctattcaggggttgccacctactgtaaggacagtgcgactccatttgcc
gctgaggagggtctcacaggtctgctgaccaaccatgaaggtgctgttggatgctacggt
gaccacactgagttttcaagcgaggagctgcagcttttggacagtgaaggacgagccgtg
atcacacagcacagaatcatgtgtcaggacaaagagcaaactgtcaccgtgatcaatgtg
tactgtccaagggccgaccctgaaaagcctgagcgaaagcagttcaaactgcagttctac
aagttgcttcagtctcgagctgaatctgtcctaaaagatgggagccatgtgattgtttta
ggagatgtaaatacatctcatcggccaatagaccactgtgatcccagtgacaatgatgat
tttagtgaaaaccctgggaggaaatggctgaatggctttttgcacagtggcagagaagaa
gaggacgacgacgatgatgaacctgatgaagagtcagaagtaacagacaccatccacagt
ggaatattcgtggatacctttcgctttttccacccaactcgcaccaatgccttcacgtgc
tggtccaccctcaccggagcgcggcagaccaactacggcacacgcattgactacatatta
gctgattgccagctggctaaggagcagtttgtggcagcggacatcatgccagaggtggag
gggtccgaccactgccctgtgtgggggaaactgagctgctctctccttcctagctccaag
gctcctcccctctgcactcgctacctgccacagtttgctggcaaacagcagaaactctct
cgcttcctggttaaggtggaccaaatatcagttcagtctgagcagaaggaggtcttacct
gcatctcaagaagaagaggaaaggagagagaatttaaacccacatggagctggaaacgtc
cctggtaaaaaacggttattaacatcacactctgttgtcccaaaggggaaaaagcctaaa
acagtaaatacctcttcaaagccacagggcagcctgctttccttttttaaacccaaacaa
gcaaatgttgggcagtgtgaaaaagaaaccggtctggatgaagatgcatcatcacacagc
agccaaaaagcaccctcagcaggagaaatgtcctcagtcacagacactggaaatcgagat
actgagcttgtcctcgatggttcatcacagctgtgctccggcagcaccacagcagaaacc
gacaaacgggtgaagacaaaacatttaagctctcagcccgctgtgggacactcagaagca
aagaaaggggcatcattagggttttggaagtcggtgcttcgtggaccaccgccaccgccc
tcctgcaaggtccacggggaaccctgtgtgcttcgtactgtaaagaaggaggggccaaac
atgggcaaacagttttttgtgtgtgcccgtcctcagggacatgcctccaacccggaggca
cgatgtaatttctttgcatgggttgacaaggggaagtga
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