KEGG   Embiotoca jacksoni (black perch): 138193339
Entry
138193339         CDS       T10523                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138193339 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eja03400]
    138193339 (xrcc1)
DNA repair and recombination proteins [BR:eja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     138193339 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 138193339
NCBI-ProteinID: XP_068997424
LinkDB
Position
Unknown
AA seq 632 aa
MPEIKVKHVVSCSTEDTTYKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSATRDQDYEVLLVTSSFMSPTESRNGTNMSRVRFFGPNQLQKSPA
QEKWDRVKIVCSQPYSKNIAYGLAFIKFHSPPDKNDPPPTSSPKLTKLGQFRVKDESPSS
GPSLQPGSLFFNRDHTTKSSTSLKVSPQSEKLSYAAAALQSGGGSLSPGQSSSSNSAAPQ
PPAKRKFEFSKERQSASGPPPSKKASLAGSPEGKAATPKHKPSPVSTPSPSTTKASPAQK
SAERKRESQSKPEPKPKQKATSQSEQQVPFNRIMEGVVFVLSGFQNPFRGELREKALDLG
AKYRPDWTLDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKLSYKRYLMDGV
ESSSESEMEVDDQSEEEVHIKTPQKQERQVTPKKTPENRDDDEYAGSTDVDEPGGDDDDS
AVDTEDELQRVEKESTVKKAAAGGAAGAAGATAKEEDPYGGSTDENTDAEAEEDHAIPEL
PDFLSRKHFFLYGKFPNNERRLLLRYIVAFNGVIEDYMTAKVQFVVTSEGWHDSFEDALM
DNGNLNFVKPAWIYAINERQKLLPYQPYSVVP
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgccggagatcaaagtaaagcacgtcgtgtcctgcagcaccgaggacacgacgtacaag
gcagacaacctgctgagctcggacacctacagaaagtggaaagcagcgagacccggggag
aagcagacatctgtcatcctgcagtttgagaaggaagagcaggtgcacagcattgacatc
gggaatgaagggtcggctttcatcgaggtgttggtggggaattcttcagctaccagagac
caggactacgaggttcttctggtcacatcttccttcatgtcccccacggagagccgtaat
ggcaccaacatgagccgggtgcgtttcttcgggcccaaccagctgcagaagagcccggcg
caggagaaatgggacagagtgaaaattgtgtgtagccagccatacagcaagaacatagcg
tacgggctcgccttcattaagttccattcaccgcctgacaaaaacgatcctccgccgact
tcttcccctaaactgacaaagctgggacagttcagggtgaaggatgagtctccttcatcc
gggcccagccttcaacctggcagcctcttcttcaatcgggaccataccacaaagtccagc
acttcactcaaagtgtctcctcagagcgagaagttgagctacgctgccgcggccctgcag
tccggcggaggctccctctcgccgggccaatcttcctcctccaattccgccgcaccacag
ccaccagcaaaaaggaaatttgagttcagcaaagagcggcagtccgcctccggccctccc
ccctcaaagaaagcaagcctggccggttcacccgagggcaaagccgccacccccaaacac
aagccgagcccggtcagcacgcccagccccagcaccaccaaagcgtcaccggcgcagaaa
tctgctgaaaggaagagggagagtcagtccaaacccgaaccgaaacccaaacagaaggca
acgtcccagagcgagcagcaggtcccgttcaaccggatcatggagggggtggtatttgtc
ctcagcggcttccagaaccccttcagaggggagctaagggaaaaggctctggacttggga
gccaagtatcggcccgactggacactggactccacacatcttatctgtgccttcgccaac
acccccaagtacagccaggtgaaatcagcaggtggcatcatcgtacgcaaggaatgggtg
atggactgccacaagaggaaacagaagctctcctacaaacggtacttgatggatggagtc
gagtccagctcggagagcgaaatggaagtggacgaccagagcgaagaggaagtgcacata
aagactccacagaagcaggagagacaagtcaccccgaaaaagacaccagaaaatagggat
gacgatgagtatgcgggctccactgatgtggatgaaccagggggcgacgacgacgactcg
gcggtggacacggaggacgagctccagagggtggaaaaggagagcacagtgaagaaagca
gcagcaggaggagcagcaggagcagcaggagcgacggcgaaggaggaggatccatacggg
gggtcgacagacgagaacacagacgctgaagctgaagaggatcacgccatccccgagcta
ccagacttcctgagcagaaagcactttttcctctacggtaaattccccaacaacgagagg
cgactcctgctgcggtacatcgttgcctttaacggagtgattgaggactacatgacggcg
aaggtgcagtttgtggtgaccagcgaagggtggcacgactccttcgaagacgcactgatg
gacaacggcaacctgaacttcgtcaaaccagcgtggatttacgccatcaacgaacgacag
aagctgctgccctatcagccctactctgtcgtcccctga

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