Embiotoca jacksoni (black perch): 138194197
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Entry
138194197 CDS
T10523
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138194197 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
eja04990
]
138194197 (snx27b)
Membrane trafficking [BR:
eja04131
]
Protein recycling
Others
Others
138194197 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
eja04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
138194197 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17-31_F2_FERM
USP7_C2
VirE3
PDZ_2
SNX17_FERM_C
RA_3
Motif
Other DBs
NCBI-GeneID:
138194197
NCBI-ProteinID:
XP_068998839
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MADVEGQGVCSSVPPLPHPSSRNGSDSGNVTPVTGGGGGCQTATTVTSGPRLVRIVKSDS
GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEG
ATHKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPSYK
HTELNHEKFVVYNVYMAGRQLCSKRYREFVVLHQNLKREFANFTFPKLPGKWPFSLSEQQ
LDARRRGLEEYLEKVCSVRVIGESDIMQDFLSESDENYNGVSDVELRIAMPDKTTLTVRV
RKNSTTDQVYQAVVMKLGMDSVTASNFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIP
GTCLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVDDVKKGFIKAEQKSYQLQKLAEQKKM
SMYLSLLRSCDGYNEIIFPHCSCDSRRKGHVITAISIHNFKLHACTEEGTLENQVIAFDW
GEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEA
TDKDNKNCSKDEYFPAAEAQKGWGHLGRQIVTS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacaaggagtttgttcctcggtgcctccgttacctcacccttcc
tcccgtaacggctccgatagcggtaacgttacaccggtcaccggcggcggcggcggctgc
cagacggcgaccaccgtcacttcgggcccgcggcttgttcgaatagtgaagtccgactcc
ggctacggtttcaatgttcggggacaagttagtgaaggagggcagctccggagcattaac
ggggagctgtacgcaccgctgcagcacgtcagcgctgtcctccccggaggtgccgccgac
agagccggtatttctaagggggaccggattctcgaggtcaatggggtgaacgtcgaagga
gcgacacataagcaggttgtggatctgatacgagccggtgagagagagctggtgctggct
gtgctgtctgtcccaccccaggaggccgactgcctggatcccggagacgacggatcagcc
cagtcctgttatgactactccgacaagcaagccgtccccatctctgttcccagctacaaa
cacaccgagctcaaccatgagaagtttgtggtatataatgtgtacatggcaggcagacag
ttgtgctccaagcgttaccgggagtttgtggttctccaccaaaacctgaagagggagttt
gccaactttacgttccccaagctgcctggaaaatggccattttcactgtcggagcagcag
ctggatgcacgacgcaggggcctggaagaatacctggagaaagtgtgctcggtacgggtg
attggagaaagtgacatcatgcaggacttcctgtctgaatcagatgagaactataacggc
gtgtcagatgtggaattgagaatagccatgcccgataaaactacgctcactgtcagagtt
cgcaaaaactctacgacagaccaggtctatcaggccgtggttatgaagctcgggatggac
agtgtaacagccagcaactttgctctgtttgaggtcatcaaccacaccttcgtgcgtaaa
cttgcccccaatgagttcccccacaaactctatgtacagaactatacctcagccattcca
gggacctgcctcaccctgcgcaagtggctcttcaccacagaagaagagattctgctcaat
gacaaccagctcgctgtcaactatttctttcaccaggctgtggatgatgtgaagaagggt
ttcatcaaagctgagcagaagtcttatcagctacagaagctggcagagcagaagaagatg
tccatgtacctgagtctgctgaggagttgtgacggctacaatgagatcatattccctcac
tgttcatgcgattcccgacgtaaaggccacgtgatcacagccatcagcattcacaacttc
aagcttcacgcctgcactgaggaggggacacttgagaaccaggtgattgcatttgactgg
ggggagatgcagaggtgggacacggatgaagagggcatggccttctgctttgaatatgca
cgaggagagaagaaacctcgctgggttaagatattcacaccctattttaactacatgcac
gagtgctttgagagagttttctgtgagctgaagtggaggaaagaggtggaagaggaggcg
acagacaaggacaataagaactgcagtaaagatgaatattttccagctgctgaggcacag
aagggatgggggcacctaggaaggcagatcgttacctcttaa
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