Embiotoca jacksoni (black perch): 138194227
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Entry
138194227 CDS
T10523
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138194227 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eja03310
]
138194227 (rorc)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138194227 (rorc)
Nuclear receptors [BR:
eja03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138194227 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138194227
NCBI-ProteinID:
XP_068998903
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All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MEYEKPDVPPADISIKRGGVVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQQQQLQGETPSVLSYPSKNRQDRSPQLLQPIVSAYSYNRDAELLPYATD
IHPYLVCSPNNSQLSGMIYRGSSHSPTSRSQGAGGNSGLPDVRGFDSRQSSHDLMAIHPY
NPLEDHHSLYPHSLRNIDELCASIVHSHRETSQYRVEELQALGWKLFSREEIQAYQSKSV
DEMWQHCAIRLTDAVQYVVEFAKHVPGFRLLSQNDQIALLKTGSMEVVLVRMCRYFNTEN
NTVFFDGKFAGIQVFKSLACGDLITAVFDFAHGMCALKLTEQQIALFSALVLINADRPCL
EDRGRVQRVQRSVEFGLTHILQRDSQESLMHKLYQRMAVLRSLCSLHMEKLRWFSQRYPL
TAHSLFPPLYKELFASEAELLPGTTH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgagaagcctgacgtgccccccgctgacatctccatcaaaagaggaggcgtc
gtgtccaagaagactcatttaacccagattgaagttatcccatgcaagatctgtggtgat
aagtcctctggagtgcattatggagtcatcacttgtgagggctgcaagggatttttccgg
cgcagccagctgcccactgtatcctactcctgctccaggcaaagtaactgtcagattgac
cgggccagccgcaaccgctgccaacactgccgtctgcagaagtgcttggcacagggcatg
agcagagacgctgtgaagtttggacggatgtccaaacgtcagcgtgactctctaattgct
gaagtggagaggcaccgtcagcaacagcagcagcaacaacagcagcttcagggagaaacc
ccgtcggtgttgtcctacccgtccaagaaccgtcaagaccgctccccccaacttcttcag
cccattgtctcagcctactcctacaaccgggacgccgagctgctgccctacgccactgat
attcacccttacctggtgtgctccccaaacaattctcagttgtctggcatgatctaccga
ggatccagccactctcccacatcaagatcccaaggggcggggggcaacagcggactccct
gatgtaagaggatttgactccagacagtcgtctcatgatctgatggcgattcatccctac
aacccgctcgaagatcatcacagcctctatcctcactctctgcgaaacatagatgagctg
tgtgccagtattgtgcattcccacagagagaccagccagtacagagtggaggaactgcag
gctcttggatggaaactgttcagcagagaggagatccaagcctaccagagcaaatcagtg
gatgagatgtggcagcactgtgccatccgactgaccgatgctgtgcagtatgtggtggag
tttgcaaaacatgtcccaggtttccgattgctcagccagaacgaccagattgcactttta
aagactggctccatggaggtggttctggtcaggatgtgtcggtattttaacacagagaac
aacactgtgttttttgatgggaaatttgctggaattcaagtcttcaagtctttggcttgt
ggtgatttaatcacggcagtgtttgactttgctcatggcatgtgtgctctgaagctcacg
gagcagcagatcgctctcttcagtgctcttgtgctgatcaatgcagatcgtccatgtctg
gaggacagaggaagagttcaacgggttcaaagaagcgtagagtttggactcacacacatt
ctacagcgagacagccaagaaagtctgatgcataagctgtaccagaggatggcagtgttg
cgttcgctgtgcagtctgcacatggagaagctgcgctggttcagtcagcgttacccgctc
actgctcactctctgtttcctccactctacaaggagctgttcgcctctgaggcagagctg
ctgcctgggaccactcactga
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