Embiotoca jacksoni (black perch): 138194372
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Entry
138194372 CDS
T10523
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138194372 (smg9)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138194372 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
DUF6079_1st
URGCP_GTPase
MMR_HSR1
NB-ARC
MeaB
AAA_18
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
138194372
NCBI-ProteinID:
XP_068999161
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQSRRRRRRRGDRDVGPPGQNLSGPSRDREYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQNAPVSGAPVLEKPIMLMKARDDAGKPLTPPEAAAQASGPGP
SKMEREGQRPTQPVYQIQNRGMGASASSSAVDPMVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGSGKSTIMSLLSANTPEEDQRSHVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSTGSSGNDDGAEYYPHIVFLQ
NKARRDDFCPRNLKNMHMVVDKLMAHSHLKYKGTLSMVDCNVFPGLGQDYLATEVNMFLL
PVQESEGEDNLTKTGSGTYPLFSLLPGYRGHPSFSTMVSKLRSQILAMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtccggccacagtcagcccggcatgtacgggcagagccgcaggaggaggcga
cgccggggagacagagatgtcggacctccggggcaaaatctgtccggtcccagtcgggat
cgggaataccagccgagagaacgaagggacgggagcgaggatccaccaggacctctcatt
cagaagacccccatcattctggcaaaaccccccggagaaagagctaagccatcacagaat
gcacccgtcagcggagctcccgtcctggagaagcccatcatgctaatgaaagccagagat
gatgcagggaagccattgactcctccagaagcagcagctcaggcgtctggtcccggaccc
tccaagatggagcgggaagggcagcgacccacacagcccgtataccagatccagaacaga
ggaatgggtgcttctgcatcgagcagcgctgtggaccccatggtcggtcagtccaaactc
cttcctccggagaagatgaagcacagcatcaagctcgtggacgatcagatgaattggtgc
gacagtgccatggagtatttgagggaccagacagacatgttggtggtgggagtcattggc
ctgcagggaagcgggaaatcgacgatcatgtcgctgttatcggccaacactccagaggaa
gatcaaaggagtcatgtattcagagcccagacccaagaaatcaaggagagaggaggaaac
caaagcacaggcattgatttcttcatcacacaggagagagtcattttcttggatacacag
ccaatcctcagcccatctattctggaccaccttatcaacaacgatcgcaagttgcctcca
gagtacaacctccctcacacatatgttgaaatgcagtccctgcagattgccgccttcctg
tttacagtgtgccatgtcgtaattgtggttcaagattggttcacagatttaaacctttac
aggtttcttcaaactgctgagatgctgaaaccttccactccgtctgcaagccatgacagc
actggctcgtcggggaatgacgatggagcagagtactatcctcacatagtgttcctccag
aataaggccagacgggacgatttctgtccgagaaatctgaagaacatgcatatggtggtg
gacaaattaatggcccattctcatctcaaatacaaaggtacactgtccatggtagactgt
aatgtcttcccaggcctggggcaggactatctggcaaccgaggtcaatatgttcctgctt
cctgtgcaggagagtgagggagaggataatctgactaaaacaggttcaggaacgtaccct
ctcttctcactgctccccgggtacagaggacacccttccttctccaccatggtttcaaaa
ctccgcagccaaatactggccatgccccgctgtcagctgtcgcacaccattctcactgag
aaaaactggtttcactacgcagctcgtatctgggatggagtgaagaagtcctcagccctc
tccgaatacagccgcctgctctgctaa
DBGET
integrated database retrieval system
