Embiotoca jacksoni (black perch): 138194413
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Entry
138194413 CDS
T10523
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138194413 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138194413 (arid1aa)
03021 Transcription machinery [BR:
eja03021
]
138194413 (arid1aa)
03036 Chromosome and associated proteins [BR:
eja03036
]
138194413 (arid1aa)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Helix-turn-helix
ARID
138194413 (arid1aa)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138194413 (arid1aa)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138194413 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138194413
NCBI-ProteinID:
XP_068999232
LinkDB
All DBs
Position
Unknown
AA seq
2398 aa
AA seq
DB search
MAAQVATLNTSPPSELKKPDRDPKEESVPGEKQSDKKQPGLESGSPGQGDLQDGADGGNA
GGGGEPEMKNGNGNPPRANNNTQNDSVGPEGNNHPGLVHHHGPAFPPPSYGYSQHYGRAP
FHQHGGQQSPGMAAAAGPVVQSSNLMDPYQPNSHEHGFSNHQFNNYNPFPNRTPYPGQAY
AMNSPRSAQAPTAGGQPAKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLTSPS
STRGYPNYPSSDYSGQEGASKGPADMGSSGQYGGSNPGWQQRSHHPSPMSPGSGGQPLAR
NQPPSPMDPMGKMRSQPYGTGGPYGQQSQQGPPTGPQPGPGYPGQSYGPPGPQRYPVGMQ
GRTPGGMGGMPYGPQMASYGQQGPGGYGSQGQAPYYGQPGQGPHTSQQQTPYSQPPPGQP
GGQTPYPGQPHPTPTSVPHTQGGPPYQQPHMPPQSQGPLPGPSQGPPQSQPPYSQASAPQ
SGQSPYAQQQGPPSQAPQQPSSQAAPGSQGPSNFPGSTQGPQQPPSQQQQSQSHPQQPPG
HSQHPQGQPVAYPQNPQNPQNPQNPQNPQQQNPQQQNPQQQQQAQQSPYQRFPPVQQQQE
VSQDSFQSNAPPSTQPKSGPEDGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSS
QGEQSNPAQSPFSPHTSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPS
SVQSDGSLHPAMSQSPMAQDRVFVQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMAPYQ
QNNSMGGYGQQGGQYGPQGYPRQPGYGNMPNANYPGPGMGSMNPMAGQGGGPPYAGMPPG
RMPPNQIGARPYAPNMAPNMAPNMAPNMAPNMPPNMAPNMAPNMPPNMPPNMAPNMAPNM
PPNMPPNMPPNMPPNMPPNMPPNMPPNMPPNMPPNMPPNMGNMPPQVGSGMCPPPGMKRN
PQDPTAMQHPATNSMHNRMPGYPNMSPGMMGSGPPYGPPMNNMPGMMNTPGGSPYPMGPN
MANNTSGMASSPEMNNKMNNKVDGGGTPKPEPKSKKSNSSTTTNEKITRLYELGPEPDRK
VWVDRYLVFIEEKAMPMTNLPAVGRKPLDLFRLYMSVKEIGGMAQVSKNKKWRDLATSLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIFTDNKKNQPAKVQPPSPASLCSTA
GSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPPGSRSSVNLQDPFSEGSDP
AFPRKNMTPNSTYQSSMNTPDMQGRMGPYEPNKDPFGNMRKVGEQFLPANQGPNSGVGDQ
QQQQQQQTPQQQQQQQQQQQQQQQPPFNRGPPGALGTMPMGPRQQFPYGPGYDRRSEQGM
GPEGNMGSGAPQPNPMMPANADTGMYSPNRFPPQQPRHDSYGNQYPGQGTPPTGSYPNQQ
PGMYPQQQSYKRPVEGGYPPSKRHESEYSGPFPGGQQAPQQQQQQQSGTSAPSSGQQESY
NQYSGSGPYPGTDRRPPGPGNQFPFPFGRERLPGATGPNAQPNMPPQMMQSGPEGPQGGM
WQGPRDINYQNYPSRQGGPGAPPQGPGFPGMNRSEEMMSPEQRMNHDGQWGGQMGPRQPS
YGPAGPGQSMPRSVQSNYQPPQGVQNHIPQVSSPASMPRPMESRTSPSKSPYMHGVMKMQ
KAGPPVPASHIVPPPVQSPLIRRDMPFPPGSIEASHPVLKPRRRLTMKDIGTPEAWRVMM
SLKSGLLAESTWALDTINILLYDDGSISTFDLNTLPGLLELVVEYFRRCLIEIFGILREY
EVGDPGQRTLLDPDALKRDWGGTDEPRVEDMEQEEEDDEDEEEREAEGPARVKEEEDEQK
CTRGQDEKTENEERKSKGSSSEQKGSSTSSPAHERPKQASKFDRFPLKVVRKKDPFVAAQ
SNNHGKLQEFDSGLLHWSAGGGDSTEHIQTHFEPRKDFLETRERIPVPTILLKRRVPEEH
VRENGLPAEEEKRKHQDEEERPKDTSFSEKAEKVSVKASASPSSDEERKTDSETKAVEKG
SKSHQENNRPIPFPESILTQQAQQTGTILEDEPHSKDEGPLIALATWQDSLARRCICVSN
IVRSLSFVPGNDHEMSKHPGLLLLLGRLILLHHRHPERKQAPLTYEKDEDSDEGVGQRDE
WWWDCLELLRENTLVTLANISGQLDLSIYPESICLPLFDGLLHWAVCPSAEAQDPFPTLG
PHSALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLIGDRKIAVCREMA
VVLLANLAQGDTMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMHFEPTS
PDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSLVSHVICDVLFLIGQS
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactctgaacactagcccgccttccgaactcaaaaaaccggat
cgagaccccaaggaagagtcggttccgggggagaagcagtcggacaaaaagcagccgggc
ttggagagcggatcgccgggccagggggatctgcaggacggggccgacggtggaaatgca
gggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagggctaacaat
aatacccagaatgactctgtcggaccggaggggaataaccaccccggtttggtgcatcac
cacggtcccgcttttcctccaccttcgtacggatacagtcagcactacggtcgggcccct
tttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggtccggtcgtg
caatcgagcaacctgatggacccgtatcaacctaattcccacgagcatggcttctccaac
caccagtttaacaattacaacccgttcccgaacaggactccttatcccggccaggcgtac
gccatgaactcccctcgcagcgcccaggcgccgacagctggggggcagccagctaagcag
cagccaccagcgggaggacccacggcgatggctggatcttacagcaaccagagatacaac
atcggaaaccctcagcctacatccacaccgacgctcaacaagctcctgacgtcccccagc
tcgacgcgcggatatccaaactacccgtcgagcgactacagcggccaagaaggagccagt
aagggaccagcggacatgggcagcagcggccagtacggagggagcaatccgggctggcaa
caaaggagccatcacccgtcgcctatgagcccgggaagcggtgggcagccgctggctcga
aaccagccacctagtcccatggacccaatgggaaaaatgagaagtcagccatatggaaca
ggcggtccatacggtcagcagtcacagcaagggcctcctacaggtccacaaccaggacct
ggttaccctggtcagagttatggcccgccaggtccccagcgatacccagtgggaatgcaa
ggacgtacccctggagggatgggtggcatgccgtatggcccacagatggcatcttacgga
cagcagggaccaggcggctatggctctcagggccaggcaccatattatggccagccaggc
caggggcctcacacaagtcagcaacaaaccccatactctcagcccccacctggacaacct
ggaggccagacaccttacccagggcaaccccacccaacgccaacatctgttccacacacc
cagggaggaccaccctatcagcagccccacatgcccccccagtcccagggtccactgcca
ggtccatcccaagggcccccacagtctcagccaccttattctcaagcctcagcgccacag
tctggccagtctccctacgcccagcagcagggtcctcccagtcaggccccacagcagcca
agttcccaggctgcccccggatcacaaggcccgtccaacttccccggatccacgcagggg
cctcagcagcccccctcgcagcaacagcagtcacagtctcacccacagcagccaccggga
catagccaacatccacaggggcagcctgtagcttacccgcagaacccgcagaacccacag
aacccacagaacccacagaacccgcagcagcagaacccgcagcagcagaacccgcagcag
cagcagcaagcacaacagtcaccttatcagcgttttcctcctgtacaacaacagcaggag
gtatcccaagactcatttcagtccaacgcccctccatccactcagcctaaatctggccca
gaggacggtcaaggccgcccctccagccttccggacctgtcggggtccatcgatgacctg
cccacaggtacagagggggccctgagtcccggcgtgagcacgtcaggtgtgtcaagcagc
cagggcgagcagagcaaccccgctcagtcgcccttctctccccacacgtccccccacctg
ccaggcatccgagggccttcaccttccccagctggctcccctgccagcgcaagcacaccc
cgtactgggccgctgtcacccgccaacatgccagggacccagatgcctcccaggccatcg
agtgtgcagtcagatgggagcctacaccctgcgatgagccagtctcctatggcccaggac
agagtgttcgtgcagagaaaccctcagatgcccccttacggctccccccagtctgcctct
gcactgtctccacgccagtcctctgggggacagatgcatcctgggatggccccatatcag
cagaacaactccatgggtggctacgggcagcagggaggacaatatggcccccaaggttat
ccccggcaacctggttatggcaacatgcccaatgccaactaccctggtccaggcatgggc
tcaatgaaccccatggccggacagggtggagggccgccatatgctggcatgcctccagga
aggatgcctcctaatcaaataggagctcgtccctatgcccccaacatggcccccaacatg
gcccccaacatggcccccaacatggcccccaacatgcctcccaacatggcccccaacatg
gcccccaacatgcctcccaacatgcctcccaacatggcccccaacatggcccccaacatg
cctcccaacatgcctcccaacatgcctcccaacatgcctcccaacatgcctcccaacatg
cctcctaacatgcctcctaacatgccccctaacatgccccctaacatgccccctaacatg
ggcaacatgccacctcaggttggctcaggaatgtgtcctcctccagggatgaaaagaaac
ccccaggatcccacagccatgcaacatcctgccaccaactccatgcacaacaggatgcct
ggttaccccaacatgtctccaggcatgatgggctctggcccaccgtatggccctccgatg
aataacatgcctggaatgatgaacactccaggtggatcaccttatcccatggggccaaac
atggccaataacacaagtggtatggcttcgagtccagagatgaacaataagatgaataac
aaagtagatgggggtggaacccctaaacctgaacccaaatcgaagaaatccaactcttcc
accacaaccaatgaaaagataacacgcctgtatgagttgggacccgagccggacaggaag
gtgtgggtggaccgttatttggtctttattgaagaaaaagccatgcccatgaccaacctg
cccgctgtaggacgcaaaccgctcgacctcttccggttatatatgtcagtcaaagagatc
ggaggaatggcacaggtgagtaagaataagaaatggcgcgatctggccacttccttaaat
gtgggtacgtccagcagtgctgccagttctttgaagaaacagtacatccagtgtctgtac
gcctttgagtgcaaaatcgagcgtggtgaagaccctcctcctgagatctttacagacaac
aaaaagaaccaacctgctaaagtccagccaccctctccagcgtccctctgctccacagct
gggtcaggctctctgcaaggtcctcagacaccccagtccaccagcagctccatggctgag
ggtggagacctaaagcctcccactccggcctccactcctcatacacaaatgccccccatg
ccacccgggtcaaggagcagtgttaacctgcaggaccctttctctgaaggaagcgaccct
gctttcccccggaagaatatgacacccaactccacctatcagtccagcatgaacacacca
gacatgcaaggtcgaatgggcccctacgaacccaacaaggacccctttggaaacatgcgg
aaagtcggggagcagtttctacctgccaaccagggcccgaacagtggggtgggtgaccag
cagcagcagcagcagcagcagacgccacaacaacaacaacaacaacaacaacagcagcag
caacaacagcagcctccattcaacagaggaccgcctggggccttgggcacgatgccaatg
gggccccgacagcagtttccttatggaccaggctacgacaggagatcggagcaaggaatg
ggcccagagggcaacatgggatccggtgctcctcagccaaaccctatgatgcctgccaac
gccgacacggggatgtattcgccaaatcgcttcccaccacagcagccacggcatgattcc
tatggtaatcagtatcctggacagggaacgccccctactggctcctacccaaaccagcaa
cctggaatgtaccctcaacagcagagttacaagcgtcctgtggaaggcggttaccctcca
tcaaagcgccatgagtcagagtacagtgggcccttccctggtggacaacaagcaccgcag
cagcagcagcaacagcaatcaggcacctctgccccttcttcaggacagcaggagtcttac
aatcagtacagcggcagtgggccctatcctggcactgatcgccgtccacctggacccggc
aatcagttcccttttccctttggtcgtgagcggttgccgggagcgacggggcccaatgct
caacccaatatgccccctcagatgatgcagtcaggccctgagggtcctcagggaggcatg
tggcagggacctcgagacatcaactatcagaactaccccagtcgacagggtggccccggg
gccccaccccagggacccggtttccccggcatgaaccgctcggaggagatgatgtcacca
gaacagcgcatgaatcacgatggccagtgggggggtcagatgggccctcggcagccttcc
tatggtccggctgggcctggccaatccatgcctcgctcagtacagtccaactaccagccc
cctcagggggtgcagaaccacattccacaggtgtccagcccagcctctatgccccgcccc
atggagagcaggacatcacccagtaaatccccctacatgcacggagtaatgaagatgcag
aaggccggccccccggtgcctgcgtctcacatagtgccccctccggtgcagtcgcctcta
ataaggcgagacatgccttttcccccaggatctatagaagcttcccatcctgtcctaaaa
ccacggcggagactcaccatgaaagatattggcaccccggaggcctggagggtcatgatg
tcgttaaagtctggtttattggccgaaagtacgtgggccttggataccattaacattctc
ctgtatgatgacggcagtatttccaccttcgatctcaacacgttgccgggcctcctggag
ttggtggttgagtatttcagacgatgcctcattgaaatctttggtattctgcgagagtat
gaggttggggaccccggccagaggacactacttgatcctgatgccttgaaacgagactgg
ggcggcacggacgaaccacgggttgaggatatggaacaagaggaagaagatgacgaagat
gaggaggaacgagaagcagaggggccagctcgtgtgaaagaggaggaagatgagcagaaa
tgcactcggggtcaggacgagaagaccgaaaatgaggagaggaagagcaagggttcttca
tctgagcagaaaggctcatcgacatcctcaccggcccatgagagacccaaacaggccagc
aagtttgacaggtttcccctgaaggtggtgcgaaagaaggacccatttgtggctgcacag
tcaaataatcacggcaaactgcaagagtttgacagtgggttacttcactggagcgctgga
gggggagactcgacagaacacatccagacccactttgaaccgcgcaaagacttcttggaa
actcgagagcgaatacccgtgcccacaattttactgaagcgacgagtcccagaagaacac
gttcgggaaaatggtttgcctgctgaggaggaaaaaaggaagcatcaagatgaggaagaa
aggccaaaagacacatctttctcagagaaagcagagaaagtctcagtgaaggcaagcgcc
tctccgagcagtgacgaggagaggaaaacagattctgagacaaaggcagtggagaaaggc
tctaaaagtcaccaggagaacaacagacccattcctttccccgaaagtattttaacccag
caggctcagcagacgggcaccatcctagaggacgagcctcacagcaaagacgaggggccg
ctcattgcactggcaacctggcaggattctttagcccggcgctgcatttgtgtctccaac
attgtccgcagcctctcctttgtgccaggcaatgaccacgagatgtccaaacatcccggg
ctgctgctgctactggggcgcctgatcctgctccaccaccgacaccctgagcgcaagcag
gccccgctcacctacgagaaggatgaggattcagacgagggagtgggccagagggatgaa
tggtggtgggactgcctcgagctcctgagggagaacacattggtcactttggcaaacatt
tcaggccaactggacctctccatctaccccgagagcatctgcttgccgctgtttgatggt
cttctccattgggccgtctgtccctcagcagaggcccaggaccccttccccacactgggc
ccccacagtgcgttgtcacctcagagactggtcctggagacgctaagcaagctaagcatc
caagacaacaatgtggacctcatcttggccactccaccattcagtcggttggagaaactg
tatgggaacttggtgcggctaatcggagacagaaagattgcggtgtgcagggagatggcc
gtggtcctgctggccaacctggcccagggtgatactatggcagcccgagcaatcgctgtt
cagaagggcagtgtgggcaacctgctgggcttcctggaggacagtctggctgccacacag
ctccaacagagccagagctctctactacacctacaggggatgcacttcgagcccacaagc
ccggacatgatgcggcgagcagcccgggctctgcacgccttagctaaggtggaggagaac
cactcagagttcacactacacgagtccagactcctcgacctctcagtgtctcccctaatg
aactcgctggtttctcatgttatctgtgatgtactctttttgatcggccagtcatga
DBGET
integrated database retrieval system
