Embiotoca jacksoni (black perch): 138194819
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Entry
138194819 CDS
T10523
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04510
Focal adhesion
eja04512
ECM-receptor interaction
eja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138194819
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138194819
09142 Cell motility
04820 Cytoskeleton in muscle cells
138194819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eja04147
]
138194819
00536 Glycosaminoglycan binding proteins [BR:
eja00536
]
138194819
Exosome [BR:
eja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138194819
Glycosaminoglycan binding proteins [BR:
eja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138194819
Hyaluronan
Extracellular matrix or blood plasma proteins
138194819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
VWA_CoxE
vWA_SIBA-E
DUF1194
HLH
Motif
Other DBs
NCBI-GeneID:
138194819
NCBI-ProteinID:
XP_068999916
LinkDB
All DBs
Position
Unknown
AA seq
2566 aa
AA seq
DB search
MEGRAGLLFSLVAACFCCTAAQIAECQDATEGDIVFLVDGSSRIAESFQNVRSFVRGIIG
GLDIGSDRVRVGLAQYSDDPHLEFLLKDHMDKASLLREVERISHRKGGKQTGEALDFLRE
QVFTEESGSRAVERKPQFAVIISTGDFSDEDVEAAQRLRRHGIMVFGIGVGQVNQDKLSA
IVNKPLQHFLLTTNSYQSLPEMTDRLLQALCTTMKAQMSALTSRFTDVFFLVDSNTVPKQ
FNIFRTELVNLITQLDVRASTYRVGLAQYSQDVKVEFLLNAHQTKQETLNAVKRFRLHRQ
PNQRGNLARALQSANNFFSEEAGGRAELGTKQMLVIVSGEISPDRMSHWANDLKSAGVTI
VGMNGLLPGLPGSSGDGTFRKVIHDHLDHFTSPNMTFDSPRVTQLKDVITTQEEVQVSQD
CRGANVADVVFIVESGSIGPAHFQLVRTFLYLIVGGLEVSRARVRVGIVTCSDKPIAEVH
LSTFSDKAEILQFINMLPYREGQTYIGAALNFTKAEMFQERLGSRAFVQKVAVVITDGRS
NDDVSEAAIALRRDGVTVYAVGIKEGDTTQLQKIASFPPYSYVFNVTSFTRLRPLRTVLQ
KSLCNNIIYQMITNVETTKYVKEACKHQDEADIFFLIDDSGSISHADFSDMKNFIIGFLK
NFHIGQQHVRIGLVKYSDAPTLEFDLTEYSDARNVEKAVKAIRHVGGGTNTGKALLYMER
YFKTRNVPEYLIVITDGKSADAVKSHAENLRRQQINIYAIGVFNSSQAELEEISGDSMRT
FSVSNFEALKSISNNIVTEICSSEACEDVPSDIFFLTASSESITDIDYQKMKDFIKSVIS
KSVIGENQVKVGVMQFSTESRLEFDLNKYNRKEDIMQAIDRMTQMNQGTRSVLGIQDVSK
YFDADRGGRPHLKQRLVLITDGNIKGNVALHAAALRAKNVEIYTVGLKDAGTKQLQEISH
SVDQVFTLRNFDELKSLVPKLALKFCKKDCEKIDKADIIFLVDGSKSIDEKEFESIRTFM
VSIVNQTTVGKELTRFGIILYSNQSESKFALKDCTSRRAVLQAIKDLLPPKSITNTGNAM
AYSVDFFTAKNGGRRELKVPQILMVITDGDATDSEKLKPSSDELRSNQITVFSIGVDEAR
TDQLHIMAAGDTSKVFYVKEFEKLETLYKNISSILCNKTKPACDRTDLVFLLDQSSNISP
AEHKAVTRFTVDLVNSFKVGEEFVRVGLAQFSTDFQHEFYLNMYYNAEDAIKHIDSLGRR
GGETNIGQALYHMRTYFQKSVGSRSNLPRNLLLITRGNSQDDVKDEADRLRAMGVQIIVI
IVGEVYDLQLLQITGTADKLIPVYNVDRFQNIKQLVIDSICYVPDKPSKDCSIDIAVGFD
ITERSGGIGKLLSSSHLMLQNHLEEIIYYASSLKNVCCTSAGPIQTRVAFHLVDRNGASL
YDAGFESYSTEVVGKVLTWPLSQPTYFNSAMLKFFMDRFRAASTASVKVLLIFSDGLDED
DVVQLENEAEQLRQSGISALLTVALDGVSDAGRLQMVEFGRGFGYKLPLSIGMPSVGSSI
LKQIDSVSDRECCNVMCKCSGHEGIRGSRGPPGSKGVPGQKGFLGFPGEEGVAGERGPPG
PSGPQGVQGCSGLRGQKGFRGLRGNRGEDGEDGLDGVNGQQGVTGTDGGRGLRGDPGNPG
IPGIRGEAGPKGERGLRGDPGESGVDNTSPGAKGDPGNQGLLGPPGLDGQPSESGVVGNP
GPDGRRGPAGEKGAPGQPGAAGLQGSPGASGPQGTRGVRGQPGPRGIPGLPGPQGGPGLA
GNPGTAGRRGAIGQKGQPGEPGDKGAAGPLGVRGMPGQDGRDGSGSPGPNGVKGDAGFPG
YPGLPGEDGLQGPAGLPGSKGTRGRGGNSGRPGESGVTGDPGYPGHKGPRGPPGDKDMTE
CQLVTYIRDNCACSIDRSLCPALPTELVFGLDMSEDVTSDAFETQRSALLSLLDDVSVAE
SNCPTGARVAVVAYSAYTKYLIRFQDYRRKNQLIEAVKNIALERTSNRRHLGAAMRFVGQ
NVFKRVRSGVLIRKVAVFFSNGPSQDVDDIVTAMMEYRGLDIVPAVVSLRNAPAVSRAME
VDDSGRSVFTVLGRQPDWAEDLRRIKNCAICYDPCRPSQDCSFIQEPLQPQQAEVDLVMV
LDGSREMWADEYAGAQRLLGSVVEQLVVSPQPRRADNRARVAVVQQGSAQTAKMEFDLQT
YQNRQRMKTHLTKNMQQQSGPSALGQTLDFTLKEVLLKAGQPRRRRALLTVVAAQTAWHD
RAKLHYISQKAKCEGVALFVVTVGDRYNRTQVEELASPPVEQHLIHFSRLKADEQRYAQR
FFRVFLSALQKGIHSYPPSSIRRTCNELSRQDGGQTSIRGQGSAQLEVEVEEEEEEEEEE
EEGVFLEQTGGQIQTGQLDIIESLTRGDGQRFISGDLVNAVCELDSDSGVPCGDVVQRWF
FDSNMAACSPFWFGGCGGNANRFNTEHQCLQTCSSQHPNIVLKTQQARDTCLQNQDQGGC
QNYTMMWFFDTEQSECSRFWYGGCGGNENRFKTQDECENLCVMKNR
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagagcaggtcttctcttcagcctcgtcgcagcgtgtttctgctgcaccgct
gctcagatcgcagagtgccaagacgccactgagggcgacatcgtcttccttgtcgatggc
tcctcccggatcgctgaaagctttcagaacgtccgctcgtttgtcagaggcatcatcggg
ggcctcgacatcggcagcgaccgagtccgggtcggcctggctcagtacagcgacgatcct
cacctggagttcctgctgaaggaccacatggacaaggcatcactgctgagagaagtggag
agaatttctcaccgaaaaggtggcaagcaaacgggcgaggccctcgacttcctccgggaa
caggtcttcacagaggagtccgggagccgagccgttgagcggaagcctcagtttgccgtg
atcatctctactggggacttctccgatgaagacgtagaagcggcccagcggctgaggagg
cacggcatcatggtgtttggtatcggggtgggacaggtcaaccaggacaaactgagcgcc
atcgttaacaagccgctgcagcacttcctcctcaccaccaacagctaccaatctctgccg
gagatgacggaccgtctgctgcaagctctgtgcaccaccatgaaggctcagatgagcgct
ttaaccagcaggtttacagatgttttcttcctggtggacagcaacacagttccaaagcag
ttcaacatcttcaggaccgagctcgtcaacctgatcactcagctcgacgtcagagcgtct
acctaccgtgttggactggctcagtacagtcaagacgtcaaggtcgaattccttcttaat
gctcatcaaaccaaacaggagaccctgaacgctgtaaaacgcttccgtctgcaccgacaa
cccaaccaacggggaaacctagcacgcgctctgcagtccgccaacaacttcttcagcgag
gaggcgggcggccgagcagaacttggcaccaaacagatgctggtcattgtgagcggcgaa
atatcacccgatcgcatgtctcattgggcgaatgacctcaaatcagccggggtgactatt
gtggggatgaatggccttttacctggattacccggttcatctggagacgggacatttcgc
aaagtcatccatgaccatctggaccatttcaccagccctaacatgacatttgattctccc
agagtgactcagctgaaggacgtcatcacaacccaggaagaggttcaagtcagtcaagat
tgcagaggagccaacgtggcagacgtcgtgttcattgttgagtccggcagcatcggacca
gctcacttccagctggtgcgcactttcctgtacttgatcgtcggtggcctggaggtcagt
cgagcgagagtccgagtgggcatcgtgacgtgcagcgacaaacccatagcggaggtccac
ctcagcaccttcagcgacaaggctgaaatcctgcagttcatcaacatgctgccttaccgt
gagggccagacgtacattggagctgccctcaatttcactaaggcagagatgttccaagag
cggctgggcagcagggcgtttgtccagaaggtggcagtggtgatcactgacggtcgttcc
aacgatgatgtgagcgaagcggcgatcgcgctccgtcgtgacggcgtcacagtttacgcc
gtaggaatcaaagaaggcgacacaactcagctgcagaagattgcttcgttccctccctac
agctatgttttcaatgtgacaagtttcaccaggctgagacccctgaggacggtcctgcag
aagagcctgtgcaacaacatcatttaccagatgattaccaacgttgagaccacaaaatac
gtcaaagaagcatgtaaacaccaggatgaagctgacatctttttcctgatcgatgactcg
ggaagcatcagtcacgcagacttcagtgacatgaagaacttcataattgggtttcttaaa
aacttccacattgggcaacaacacgttcgcatcgggctggtgaagtactccgatgcgccc
accctagagtttgacctgacggaatactcggatgctcggaatgtggagaaagcagtgaag
gcgataaggcacgtgggaggcgggaccaacacaggaaaagctctgttatacatggaacgt
tattttaagactcgtaatgtcccagagtacctgattgtcatcaccgatggaaaatctgct
gatgcagtcaaaagtcacgcagaaaacttaaggagacagcaaatcaacatctacgccatc
ggggtgttcaattcaagccaggctgagctggaggagatctccggtgactccatgaggact
ttctctgtcagtaactttgaggccctgaagtccatcagcaacaacattgtcacagagatc
tgctcttcagaggcttgcgaagatgtaccgagcgacatatttttcttaactgccagctct
gagagcatcactgacatcgactatcagaaaatgaaagacttcattaaatctgtcatcagc
aagtcggtcattggggagaaccaggtgaaagttggcgtcatgcagttcagcacagaatct
cgtctggagtttgacctcaacaagtacaacagaaaagaggacataatgcaggcgatcgac
cgcatgactcagatgaatcaaggcactcgcagcgtattgggcattcaggatgtctcaaag
tactttgatgcagacagaggaggacgccctcacctgaagcagagattggtactgataaca
gatggtaacatcaaaggtaatgtcgcgctccacgctgcagctctccgggccaagaacgtg
gagatctacactgtgggactgaaggacgccggcaccaagcagctgcaggagatcagccac
tccgtggaccaggtctttactctgagaaactttgacgaactgaagtcactggtgcccaag
ctggccttaaagttctgtaagaaagattgtgagaagatagataaagctgatatcattttc
ctggtggacggctccaaaagtatagatgagaaagagttcgaaagcatacgaacctttatg
gtgtccatagtgaaccagaccaccgtcgggaaggagctgactcgctttgggatcattctc
tactccaaccaatctgagtccaagtttgctctcaaagattgtacctctagaagagccgtt
cttcaagcaataaaagatttgttaccgccaaaaagcataacaaatacaggcaacgccatg
gcctactccgtagacttcttcactgccaagaacggcggccgcagagagctcaaagtgcct
cagattctcatggtgatcacagacggcgacgccaccgactctgagaaactgaagccgtca
tctgatgagctgcgttccaaccagatcaccgtcttcagcatcggagtggacgaggcaaga
acagaccagctgcacatcatggccgcaggcgacacgtccaaagtcttctacgtgaaagag
tttgagaaactggaaactctgtacaagaatatttcttctatcctctgcaataagaccaag
ccagcttgtgaccggaccgatttggtctttctgctggatcagtccagcaacatcagccca
gccgaacacaaagccgtgacccggttcaccgtggacctggtcaacagctttaaagtcggt
gaagagttcgtgcgtgtcggactcgcacagttcagtaccgactttcagcatgagttttac
ctcaacatgtactacaacgctgaggatgcgatcaagcacatcgacagcctgggacgccgc
ggcggagagaccaacatcggacaagccttgtaccacatgaggacgtacttccagaagtcg
gtcggcagccgcagcaacttacccaggaacctgctgctgatcacacgcggtaactctcag
gatgacgtgaaggatgaagccgaccgcctccgggcgatgggggtccagataatagtcatc
atagttggagaggtctacgacctgcagctcctgcagatcaccggaacggcggacaaacta
atccctgtctacaatgtcgaccgcttccaaaatatcaaacaattggttatcgacagcatc
tgctacgtcccggacaagccctcgaaggactgcagcatcgacatcgccgtaggcttcgac
atcactgagagaagcggaggcatcggcaagctgctgagcagcagccacttgatgctccag
aaccacctggaggagatcatctattacgcctcctcgttgaaaaacgtgtgctgcaccagc
gccggaccgatccagaccagggtggccttccacctggtggaccgcaatggagcctcgctg
tacgacgccggcttcgaaagctacagcaccgaggtggtggggaaagtgctgacctggccg
ctgtctcagcccacctacttcaactctgccatgctcaagttcttcatggacaggttcaga
gccgcgtccaccgccagcgtcaaggtgctgctgatcttctccgacggactcgacgaagac
gacgtcgtgcagctggagaacgaagccgagcagctgcgacagtcgggcatcagcgcgctg
ctcaccgtcgctctggacggagtcagcgacgccggccggctgcagatggttgagttcggc
cgcggcttcggatacaagcttcctctgagcatcggcatgccgagcgtcggcagcagcatc
ctcaagcagatcgactccgtgtcggatcgcgagtgctgcaacgtcatgtgcaagtgttcg
ggacatgaaggcatccggggctctcggggccccccggggtcaaagggcgtcccgggacag
aagggattcctcggcttccccggagaggagggcgtcgccggcgagcgggggcctcccggg
ccgagtggacctcagggcgttcagggttgctcaggactccgaggacagaagggcttcaga
ggtctgcggggaaacaggggcgaagacggagaggacgggctggacggagtcaacggacaa
cagggagtgacgggaacagatggaggtcgaggactgagaggagacccaggaaacccgggt
atccctggtatcagaggggaggcggggcctaaaggagagcgaggactgagaggagatccg
ggtgaatcaggagttgacaacacctccccaggagctaaaggagaccccggtaatcagggt
ttactgggtccacctgggctggacggccagcccagtgagagcggcgtcgtcggaaacccg
ggtcctgatggaagacgaggacctgctggagaaaagggtgcaccaggtcaacctggagct
gcaggactgcagggcagccccggagcttcaggtcctcagggtaccagaggggtcagaggt
caacctggacccagagggatccccggccttcctggacctcagggcggaccgggactggct
gggaacccggggacggccggacgccgcggcgccattggacagaaaggccagcccggagag
cctggtgataaaggagctgcaggtccgctgggagttcgagggatgccgggtcaggacggc
cgggacgggtccggatctccaggacccaatggtgtgaagggagatgctggtttccctggt
taccccgggttaccgggtgaagacggtcttcagggaccggcaggacttccaggcagtaaa
gggacccgaggccgcgggggaaactcgggccggccgggagagtcgggagtgaccggagat
ccaggatatccaggacacaagggtccccgaggtcctcctggagataaagacatgacagag
tgtcagctggtcacctacatcagagataactgtgcttgttccatcgatcgatccctgtgc
cccgccctccccaccgagctcgtcttcggcctggacatgtcggaggacgtgacctcggac
gccttcgagacgcagcgctccgccctcctctccctgctggacgacgtcagcgtcgccgag
agcaactgtccgaccggcgcccgcgtcgccgtggtggcgtacagcgcctacaccaagtac
ctgatccgcttccaggactaccgccgcaagaaccagctgatcgaggccgtgaagaacatc
gccctggagaggacgtccaaccggcgccacctgggggccgccatgcgcttcgtgggccag
aacgtcttcaaacgcgtccgatcgggagtgctgatcaggaaggtggcggtcttcttctcc
aacgggccttcgcaggacgtcgacgacatcgtgaccgccatgatggagtaccggggcctc
gacatcgtcccggcggtcgtgtctctgaggaacgctcccgctgtcagccgggcgatggag
gtggacgactcgggccgctccgtcttcacggttctggggaggcagccggactgggccgag
gacctccggaggatcaagaactgtgcgatctgttacgacccctgcaggccgtcccaggac
tgctccttcatccaggagccgctgcagcctcagcaggccgaggtggacctggtgatggtt
ctggacggctccagggagatgtgggccgacgagtacgccggcgctcagcggctgctgggc
tccgtggtggagcagctggtcgtgagccctcagccccgccgggccgacaaccgggcccgg
gtggccgtggtccagcagggctccgcccagaccgccaagatggagttcgacctgcagacc
taccagaaccggcagcggatgaagacgcacctgacgaagaacatgcagcagcagagcggc
ccctcggcgctgggacagacgctggacttcaccctgaaggaggttctgctgaaggcgggt
cagccgcgcaggaggagggcgctgctgaccgtggtggccgcccagaccgcctggcacgac
cgagccaagctgcactacatctcccagaaggccaagtgtgagggggtggcgctgttcgtg
gtgacggtcggcgaccgctacaaccggacgcaggtggaggagctggccagtccgccggtg
gagcagcacctgatccacttcagccggctgaaggctgacgagcagcgctacgcccagcgc
ttcttcagggtcttcctgtcagcccttcaaaagggaatccactcgtatcctccgtcctcg
atcagacggacctgcaacgagctgagcagacaagatggaggacaaacatccatcagaggt
cagggctcggctcagctggaggtggaggtcgaagaggaggaggaggaggaggaggaggaa
gaagagggggtgtttctggagcagacggggggacagattcagaccggacagctggacatc
atcgagagtctgaccagaggagacggacagagattcatctcaggagacctggttaacgcc
gtctgcgagctggactctgattctggcgtcccgtgtggcgacgttgtccaacgatggttc
tttgactcaaacatggctgcatgctctcccttctggttcggcggctgcggcggaaacgcc
aaccgctttaacacggagcaccaatgtttgcagacgtgtagctcgcagcatccaaacatc
gtgctgaagacgcagcaagccagagacacctgcctccagaaccaggaccagggcggctgc
cagaactacaccatgatgtggttcttcgacaccgagcagagcgagtgctcccgcttctgg
tacggcggctgcggcggcaacgagaaccgcttcaaaacacaagatgagtgcgagaacctg
tgtgtgatgaagaaccgatga
DBGET
integrated database retrieval system
