Embiotoca jacksoni (black perch): 138195042
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Entry
138195042 CDS
T10523
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1a
KO
K16501
cadherin-related family member 1
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138195042 (cdhr1a)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Cadherin related
138195042 (cdhr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
138195042
NCBI-ProteinID:
XP_069000206
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MLRAKCSLKALLFLQEAQADFAPYFYDNGPYIHNGNLALFSLSEDTAVGTQIYSLNGTDP
EGQEVMYGLSFDPGSKEYFRVDPKSGNITLVEKLDREKQDSIDVHVSITDGQSKVVERVT
IFVMDTNDEKPEFQNMPAIINVVETTDSGSSIYKVEAVDRDTGSGGSVTYYLQNPRPTLF
AIDRHSGVLRIKSGEMLDYEKTKTHFVTVVVKDGGGNFNGKEQFLSSSATLTINVIDAQD
TPPSFTGMPYFGYVYEVSVPGSEIFTVVAKDGDIGNPHPICYSFDDGNDGVFSINKTSGV
ITLLTLPIYLKREIFNIKVRASEVSLEGRLLDHELAMVVIRVVDLNNNPPTFYGENGTQN
MFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLKLIGPGRMLRVVPQTVLNEAQVTI
LVEDSAAMDYEKHQFLTYKLLAVEIDTAERFSATADIIIHLLDTNDNAPKFSSDYYIARI
PENSPGGSNVVSVTATDPDSGPWGEVKYSIYGSGADLFLIQPTTGIIYTQPWASLDAEVR
SKYNFYVKAEDTEGKYSLAEVFVTVLDLNDHPPAFNDNFLEKTMVIGAPVKIEAVDDDAE
VPNNVIEYAIMKAEPDNNIFDINSDTGEIMLKSYIKSMAIIQNITKQSDCTWSLVVQARD
RGQPSFSTTAVVKIDITEATQLKGGPLESFLMQNRNRPLQILGMLAGVISLMVLVTVIIS
TATFLRHKKSNRILPNRRVRRRPQTQHTWKFKNPFKKEEPPGDKFIVEEDVQEPEVIVEN
VNYNNNISNIVRHWSPPPPPSAPSLPPPPPPFNPGERKWVIPTVSATVVAPRPKKKPEIT
KQDTVNRALVSELKMRLEQMRRMEH
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagctaaatgctcactgaaagctttgctcttcctgcaggaggcacaagcagac
tttgccccgtatttctatgacaatggaccctacatccacaacggaaacctggcgctattc
agcctctcagaggacacggctgtcggtacacagatctatagtctcaatggcacagaccct
gagggccaggaggtgatgtatggcctctcttttgatcctgggtccaaagagtacttcagg
gtcgaccccaaatctgggaacatcacattagtggaaaagctggacagagagaaacaagat
tctatcgatgttcatgtgagcatcacagatgggcaaagcaaggttgtggaaagggtcaca
atatttgttatggatacaaatgatgaaaagcctgaattccaaaacatgcctgcaatcatc
aatgtagtggagacaactgattctggaagcagcatctacaaagtcgaagcagtggacaga
gacacgggctcaggaggctcagtcacatactacctccagaatcctcggcccactttgttt
gccattgacagacatagtggtgtactgcgtatcaaatctggagaaatgttggactatgaa
aaaacaaagacacactttgtcactgttgttgtaaaggatggtggtggtaactttaatggg
aaggagcagtttctgtcatcttctgctaccttgacaattaacgtgatcgatgcacaagac
actcctccatctttcactgggatgccctacttcggctacgtttatgaagtctcagtgcct
ggatcggaaatattcacggttgttgccaaagatggtgacatagggaacccacatccaatc
tgctactcatttgatgacggcaacgatggtgtttttagcatcaataaaacgagcggtgtt
attactctgctgactctccccatttatctgaagagagaaatctttaacatcaaagtcagg
gcttcagaggtcagccttgaaggcagactcttggaccatgagttagccatggtggtgatc
cgtgtggttgacctaaacaacaatccaccaactttctatggagagaacggcacacagaac
atgtttgagttgaccatgtacgagcatccaccggagggagagatcctgcgggggctgaaa
atcactgtcaatgactctgatcagggtgctaatgctaaattcaatctgaaactgattgga
ccaggaagaatgctgcgagtcgtcccgcagacggttctcaatgaagcccaagttacaatc
ttagtggaagactctgctgccatggactatgagaaacatcaatttctaacatacaagctt
cttgcggttgagattgatactgcggagagattcagcgccacagctgacataatcattcat
ctcctggacaccaacgacaacgctcccaaattctcctcagattactacatcgccagaata
ccagaaaactcacccggcggctccaatgtggtgtcagtcacggcgacagacccagactct
gggccctggggagaagtgaagtactctatctatggatcaggggctgacttgttcctgatc
cagccaacaactgggatcatctacacccagccgtgggcgagcctggatgcagaggtgagg
tccaagtataacttctacgtgaaggcggaggacaccgaggggaagtacagcctggctgaa
gtctttgtgactgtgctggacctgaacgaccatccacctgctttcaatgacaacttcctt
gagaagaccatggtgattggagcaccagtaaaaatagaggctgtagacgatgatgcggag
gtaccaaacaacgtcattgagtacgccatcatgaaagctgagccagacaacaacatcttt
gacattaactctgatacgggggaaatcatgctcaagtcctacatcaagtccatggccatc
attcagaacatcaccaagcagagtgactgcacctggtcgctggtggtgcaggcccgggac
agaggccagccgtcgttcagcaccactgcagtcgtcaagattgacatcaccgaagctacc
caactgaaaggggggcctttggaatcatttttaatgcagaatagaaacaggcctttgcaa
atcctaggcatgcttgctggtgtcattagtctcatggtcttagtcacggtcatcatctcc
actgcaacattcttgcgccacaaaaagtccaaccgcatccttcccaaccgccgtgtgagg
agaaggccacagacacagcacacctggaaattcaaaaaccccttcaagaaagaggaacct
cccggggacaaattcatagttgaggaggatgtgcaggagccagaggtcatcgtggagaat
gtcaactataacaacaatatcagcaacattgtgagacattggtccccacctccaccaccc
agtgcgccttctctgccccctccaccacctcctttcaacccaggggagaggaagtgggtc
atacccacagtctcagcaacagtagtggcaccccgacccaaaaagaagccagagataacg
aaacaggacacggtgaacagagcgctggtttcagagctcaagatgagattggagcaaatg
aggaggatggagcattaa
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