Embiotoca jacksoni (black perch): 138195151
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Entry
138195151 CDS
T10523
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138195151 (ddx43)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138195151 (ddx43)
Spliceosome [BR:
eja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138195151 (ddx43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
KH_PNO1_2nd
ResIII
KH-I_KHDC4-BBP
KH_2
CMS1
Motif
Other DBs
NCBI-GeneID:
138195151
NCBI-ProteinID:
XP_069000366
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSDWEDEYDEDGVAIEKRAPKSAPSQWTRPCEDRRRENVFFGAKNGAAFGADGYKSRSGG
GDRGGPGRQWTITVENALIGRIIGRGGTKIRELEEGTGARIKINKGDYEGEVVIFGSPAA
QQKAKEMIEDLVADGGSRFYNGGSDGQGSRGRGGGGGGGVVQHDSVWSAAQLQAATVVRP
RPSIDWNAIRENKDKYEELKWKDLAPMKKKFYTEAKCVSLLTAEEVSDWRKENNNVFVDD
LKEEGEKRPVPNPCRTFLESFELYPEIMENIKRVGFVKPTPIQSQAWPVLLSGEDLIAIA
QTGTGKTLAYLLPGFIHMDGQPVPRAERGGPGMLVLTPTRELALQIETECNKYRYKGYKS
ICIYGGGDRRAQINLVKGGVDIVIATPGRLHDLQMNELINLRSVTYLVLDEADRMLDMGF
EPQILKILLDVRPDRQTIMTSATWPTGVRRLSKSYLKNPMMVYVGTLDLAAVNTVQQTVL
IVQEEEKKPYVYDFIRNMLPQDKVLVFVGKKLMADDLSSDLCLQGLAVQSLHGDREQCDR
EEALKDFKEGRVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRSGA
AVTLITRENWRMAPELIPILERAGQEVPEELVLMAERYEKQKREKDMSNPRGGRGGGGGG
GRGGRDRGQNWGF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaagatgaatacgacgaggacggcgttgctatcgagaagcgtgctcca
aaatcggctccgagtcaatggactcgtccgtgtgaggaccgtcgaagggaaaatgtattt
tttggtgcaaaaaatggagccgcgtttggagccgacgggtacaaaagtcggagcggcgga
ggcgaccgcggaggcccgggacgacagtggaccattaccgtggaaaatgctttaattggg
aggataataggtcgcggaggaaccaaaatccgtgaacttgaagagggcaccggtgcaaga
atcaagataaacaagggcgactatgaaggcgaggtcgtcatctttggctcccctgctgcc
cagcagaaggcgaaggagatgattgaagacctggtggcagatggcggctcgagattttac
aatggaggcagtgacggacaaggctcccgagggagaggtggtggtggtggtggtggtgtc
gtccaacatgactccgtctggtcggctgcacagttacaggctgcgactgttgtccgacct
cgtccttccatcgactggaacgccatccgggagaacaaagataagtacgaggagctgaag
tggaaggacctcgcacccatgaagaagaagttctacaccgaggcaaagtgtgtgtccttg
ctcacagcagaggaagtcagtgactggaggaaggagaataataatgtttttgtggatgac
ctgaaggaggaaggggagaaacgccccgtccccaatccctgtcgcacctttctggagtcc
tttgagctttacccagagatcatggaaaatattaagcgggttggctttgtcaaaccaacc
cccatccagtctcaggcgtggccagtgttgctaagcggagaggacctgatagccattgct
cagacaggaacagggaaaacgctggcctacctgctgccggggttcatccacatggacgga
cagcccgtaccgagagccgagcgtggtggtccgggcatgttggtgctgactcctaccaga
gagctcgccttgcagattgaaaccgagtgcaacaagtaccgttacaagggttacaaaagt
atctgcatctatggcggaggtgatcggagagcccagatcaacctggtgaagggcggggtg
gacatagtgatcgctacaccgggccggctgcacgatctccagatgaacgagctcatcaat
cttcgctcagtcacctacttggtgctggacgaggctgaccgtatgctcgatatgggcttt
gaacctcagattttgaagattcttctcgacgtccgtccagaccgacagaccatcatgacc
agtgccacctggcccactggtgtgagacgattgtccaaatcatacctaaagaatccaatg
atggtttatgtggggaccctggacttggcggctgttaacacggtgcagcaaacagtgctg
attgttcaagaagaggagaaaaagccttacgtatacgatttcatcagaaacatgctgccg
caggacaaagtcctcgtctttgttggaaagaagctcatggctgatgacctgtccagtgac
ttgtgtctgcagggtctggctgtgcagagtctccacggcgaccgtgagcagtgtgaccgc
gaagaagcgctcaaggactttaaagagggtcgagttcgtatcctagttgccacagacttg
gcatctcgggggttggatgtccacgacataacgcatgtctttaactttgacttcccacgt
aacatagaggagtacgtccatcgcgtgggccgcaccggtcgagcaggacgttcaggtgct
gctgttaccctgataacaagagaaaactggaggatggccccggagctgattcccatctta
gagcgagcagggcaggaagtccctgaggagctggtgcttatggcagaaagatacgagaag
caaaagagggagaaggacatgtccaatccaaggggaggacgaggaggaggaggtggtgga
gggagaggcggcagggaccgaggtcagaactggggattctaa
DBGET
integrated database retrieval system
