Embiotoca jacksoni (black perch): 138196175
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Entry
138196175 CDS
T10523
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
138196175 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138196175 (irf1b)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138196175 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
138196175
NCBI-ProteinID:
XP_069002073
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MPVSRMRMRPWLEKMIESKSIAGLNWVDKDNTMFSIPWKHAARHGWELDKDACLFKMWAI
HTGKYVEGQTTDPKTWKANFRCAMNSLPDIEEVKDKSVNKGHQAMRVFRMLPATPKSRDK
QGKARETKPRRKCAQVKIEEDTDYSDAQSPMDESLSEDTMSTQESTIDSTVRTEEPDFSF
VSTLEVPDWSQSVEIGPDSFSPSFCHRFEVSPEHHPVYEDIIEICKQLENDNNWSSVDSN
GFLSNELCNSPGSHWSDSSSVDELDELPQYTTLGSEYTNPTDDLWNSFCYQISPML
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtcaaggatgaggatgaggccctggctggagaagatgatcgagtccaaatcc
atcgctggtctgaactgggtggacaaggataacacgatgttctcgattccttggaagcac
gcagctcgacacggctgggagctggacaaggacgcatgtctgttcaaaatgtgggccatc
cacacagggaaatacgtcgagggccagactactgaccccaagacatggaaagccaacttc
cgctgtgcaatgaactctctgcctgacatcgaggaggtgaaagacaagagcgtcaacaaa
ggccaccaagccatgcgcgtcttcaggatgctgcctgctaccccaaaatcgagagataag
caaggcaaagcaagggagacaaagccgaggaggaagtgcgctcaggtcaagatagaggaa
gacacggactacagtgatgcgcagtctcccatggacgagtcactgtcagaggacactatg
tccactcaggaaagcacaatcgacagcacggtgcggacggaagagccagatttctccttc
gtgtctacgcttgaagttccggactggtctcagtcagttgagattggacctgacagcttt
tctcccagtttctgccacagatttgaagtttcacctgagcaccaccccgtatacgaagac
attattgagatttgcaagcaactggagaatgacaacaactggagcagtgtagacagcaac
gggttcctgagcaatgaactatgcaacagtccagggagccattggagtgactcttcctca
gtcgacgaactagatgagctgccacaatacacaactttgggctcagagtacaccaacccc
acagacgacctctggaacagcttttgctatcagatctctccgatgctctga
DBGET
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