Embiotoca jacksoni (black perch): 138196220 Help Entry 138196220         CDS       T10523                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism eja  Embiotoca jacksoni (black perch) Pathway eja03440   Homologous recombination eja03450   Non-homologous end-joining eja04218   Cellular senescence Brite KEGG Orthology (KO) [BR:eja00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     138196220 (rad50)    03450 Non-homologous end-joining     138196220 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     138196220 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:eja03032]     138196220 (rad50)    03400 DNA repair and recombination proteins [BR:eja03400]     138196220 (rad50) DNA replication proteins [BR:eja03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     138196220 (rad50) DNA repair and recombination proteins [BR:eja03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      138196220 (rad50)     BRCA1-C complex      138196220 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      138196220 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N ABC_tran zf-met AAA_29 AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  138196220 NCBI-ProteinID:  XP_069002157 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGVEDKDQQVISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFCDVNGQKVTVQRSMSCTQKAKNNSFKRLEQVITR IIDGKKMSMSSKCCDVDLEMISCLGVSKSVLNNVIFCHQEESNWPLSEGKALKDKFDSIF SATKYIKALDTMRQLRLKQSQTVKECQLELRYLKQNKEKAQHIRETLGTKEAQLIASRDS VQQIDSQIDPLETRLVAIELKLGKVMKLDNDIKALDSRKKQMEEDNRELEETMEQVFQGS DEQLQEIYQNHQGTVKEKERRLTDCQKELERAGRECQRLNRVNADLLVEQGRLQLEADHH TQNIKNRDTQVRSLSSYLEMEGYDRPPFTTLQLDSFHRQATQRLEQEKETVSQVMADLHE KEQQKQQYIDEMRDKKTGLERTVELKRDLQGKKQQELRDIRADLQRLEGSSSRLQELENE LAKADRELQSAVQSSNVEELKAEVVELQREKAELDRTQRQLDQEMEALNTHTTARTQMDM LKKDKTEKEEQVRKIKSRHSEDLVSLLGHFPNKRELEDWIYSKSKEINSTRDRLVKLNKD LASSEQNKSHISAELRKKEQQLTSNEEKFFNVCGSQDLEQDLSKLQEDLEKISKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK RKERKKDDMMALRPVKQSIVQFQENELPELRNRLQTVNREIERLKGDVEEQETLLGTLMS EEETAKACLQDISLMDRYLMDLKEVERKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQMLKSAVNETRAEKLQLSSDMQKQQQLEEQCVEFTTEIQA LTRDIREAKEQLSPLSAALEKLQQEKQELVERKRQRQEEGQEKINSIKEKVKAITSLERD VTTYVNEGKDEYKEQKESELQETNTRLHEAEKNKEKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKDVVARREALLKDMGNMQVVQLHQERREAERKLEDLKKNRSIALGRQKG FEEQILEHRKELREDQYDKADERYKNKMIAMRTTELVIKDLDLYYKALDQTIMKFHSMKM DEINKIIKDLWRSTYRGQDIEYVEIRSDVDENSYAGTKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALIEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIEHFFRIRKDQDQNSEITKCTIASLSSYVH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcaaagatagacaagatgagcatcctgggggtgcggagctttggggtcgaggataaa gatcaacaagtcatctcgttcttcactccgttaactgtgctggtcggacccaatggagca gggaaaacgactattattgaatgccttaaatatgcaacatcaggagaacttccacctgga tcaaaaggaggtgcttttgttcatgatccaaaggatgcccatgagacggacgtacgagca cagattcgtctcttattctgtgatgtcaacggacagaaagtgaccgtccaacgctccatg tcctgcactcagaaggcaaagaacaactccttcaaacgcttagagcaggtcatcaccaga ataatagacgggaagaaaatgagcatgtcttctaaatgttgtgacgtggacctggagatg atttcttgtctgggtgtgtcgaagtctgtgctgaataacgtcatcttctgtcaccaagaa gagtctaactggcctctcagtgagggcaaagccctcaaagacaagtttgactccatcttc tctgcaaccaagtacatcaaagctctggatacaatgcgtcagctccggctcaaacaaagt cagacagtcaaagagtgtcagctggagctgcgctacctgaagcagaacaaggagaaggcc cagcacattagagagactctgggcaccaaggaggctcagctgatagcctcaagagacagt gtgcagcagatagatagccagattgatccacttgagactcgactggtagctattgaactg aaacttgggaaagtaatgaagctggacaacgatatcaaggctttggacagcaggaagaaa cagatggaagaggacaacagggagctggaggaaaccatggagcaggtgttccagggttca gacgaacagctacaggagatttaccagaaccaccaggggacggtaaaggagaaggagcgc aggctgacagactgccagaaggagctggagagagctggccgagagtgccagagactcaac agggtcaacgctgatctcctggtagaacaaggtcgtcttcagctggaagccgaccatcac actcaaaacatcaagaaccgtgacactcaggttcggtctttgtcatcctatctggagatg gagggttacgaccggccgcccttcaccactcttcagctcgacagttttcatcgtcaagcc acacagagactggagcaggaaaaagagacagttagtcaggttatggcggacctgcatgaa aaggagcagcagaagcagcagtatattgatgaaatgagggataagaagactggcctggag agaacagtggagctgaagagagacctacagggaaagaagcagcaggagctgagggacatc agggcggacctgcagaggctggagggttcatcgagtcgactgcaagagctggaaaatgaa ttggctaaagcggatcgtgagctgcagagcgccgtgcagagctccaacgtggaggagctg aaggcggaggttgtggagctccaaagagaaaaggccgagcttgaccgcacacagagacag ctcgaccaggagatggaggcactcaacacgcacacaactgcacgcacgcagatggacatg ctgaaaaaggacaagacagagaaggaggagcaggtgcgtaagatcaagtctcgtcacagc gaggatctggtgtccctactgggccactttcccaacaagagagagctggaggactggatc tactccaagtccaaggagatcaacagcaccagggacagacttgtaaaactcaataaggac ttggcatcaagtgagcagaataaaagccacatttccgccgaactgcgcaagaaggagcag cagttaaccagcaatgaagagaagttcttcaacgtgtgtggcagtcaggatctggaacag gatctcagcaagctgcaagaagatctggagaagatatccaaacaaagagccatgctcgct ggagccacagcagtgtacacccagttcatcagtcagctgacggaggagagggagccctgc tgccccgtgtgccagcgaacgttcccctcagagtccgatctgcaggaagttatcagcgac atgcagtcgaagctgcgcctggtgccggacaaactgaaaaacacagagcaggacctgaag aggaaggagaggaagaaagatgacatgatggccctcagacctgtcaagcagtccattgtt cagtttcaggaaaatgagctgcctgagttgagaaaccgtctgcagactgtgaacagagaa attgagaggctgaagggtgacgtggaggagcaggagactctgcttgggaccctgatgtct gaggaggaaacagccaaggcctgcctgcaggacatatctctcatggacagatacctgatg gaccttaaagaagtggagaggaaaatagctcagcaggcagctaaactccagggagtagac ctgaccagaaccatccagcaagtcagtcaggagaaacaagaaactcagcacaagctggac accacctccagcaagatggagctgaaacgtaagctgatccaggaccagcaggatcagatt cagatgctgaaaagtgccgtgaatgagacgagagcagagaagctccagctgagcagtgac atgcagaagcagcagcagctggaggagcagtgtgtcgagttcaccaccgagatacaggcc ttaaccagggacatcagggaggcaaaggaacagctgtctcctctgtctgctgctctggag aaactgcagcaggagaagcaggagctggtggagcgcaagaggcagaggcaggaagaaggg caggagaagattaattctattaaagagaaagtaaaggcgatcaccagcttggaaagagac gtcactacatacgtcaatgagggcaaagatgaatacaaagagcaaaaggagtccgagctt caagaaaccaacactcggctccatgaggcggagaagaataaagagaagattaataaggag atgggaaacattcgtcaggacatagacactcaaaaggtccaggagcgctggttacaggac aacctgaccttgaggaagcgtgttgaggagttgaaggatgtggtggccagacgtgaggct ctgctgaaagacatgggcaacatgcaagtcgtgcagctacaccaagaacgtcgtgaagcg gaacgcaagttggaagacttgaaaaagaaccgcagtattgcactgggtcgtcagaaaggc tttgaagagcagatactggaacacagaaaagagctgcgagaagatcagtatgacaaagcg gatgagcgctacaaaaacaagatgattgcgatgaggaccacagagctggtcattaaagac ctggatctctattacaaggctcttgatcaaaccatcatgaaattccacagcatgaagatg gatgagatcaataagattatcaaagacctgtggcgcagcacctacaggggtcaagatatc gagtacgtggagatcagatccgacgtggatgagaattcgtacgctggaacgaagcggaga gtttacaactacagagtagttatggtgaaaggagacaccgctttggacatgaggggacgc tgcagcgctggacagaaggtgttggcatccctgatcatccgtctagctctggccgagacg ttctgtctgaactgtgggatcctggccctggatgagcccactaccaacctggaccgggag aacatcgagtcactggcacacgccctgatcgagatcattaaaagtcgctctcgccagagg aacttccagctgctcattatcacccacgacgaggacttcgtggagctgctggggcggtcc agctacatcgaacacttcttccgcatccgtaaggaccaggaccagaactccgaaatcacc aagtgcaccatcgcctcgctctcctcctatgtccactaa

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