Embiotoca jacksoni (black perch): 138196323
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Entry
138196323 CDS
T10523
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138196323 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eja03036
]
138196323 (pds5b)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138196323 (pds5b)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
138196323 (pds5b)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
138196323 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
HEAT_EF3_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
138196323
NCBI-ProteinID:
XP_069002336
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MAHSKARAADGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLETSERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRHHVKDLLDLVKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLDDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKMEESFPHIKSVLLPVLQAKAKR
GPPRQAKYAIHCINTMFTNRDTHFAQIFEPLHKGLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDEEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFSQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLFSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENMKQTKDAQAPTDPKTNEKLYTVCDVAMHIIMSKS
TTYSLESPKDPVLPSRFFTKPDKNFSNTKNYLPPEMKVFFTPGKPKSANVLGAVNKPLST
AGKQLQSKASRMETASNEDPSSNPGSPQRSKTRLDSTEMDHSENEDISLKRADSVDKDIE
KPRGRKRGVTSGDDQESKPKRGRKKAAANTPAAAESEDQWDEDTRPEDEQNSPPKKGRRG
RPPKSATPNQDTPSKGRRGRKKAAPPPEEEEEEEEEEEERVEEEAAAAAEVEDEEDDGSS
ENMEAKPKGGRQTRAPRRSQGSTEAAEATPQKRRGRPPKSAQPAAKKPARGGRSKAAASK
DDSEEEDEEEEEEQEDEPTPKGRKKAAGRRR
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccgcagacgggaaggtgacctaccccccgggggtcaag
gagatctctgacaaaatatccaaagaggaaatggtccgcaggctcaagatggtcgtgaag
accttcatggacatggaccaggactctgaggaagagaaagagctgtacctgaacctggcc
ctccacctggcctccgacttctttctcaaacatccagacaaggacgtgcgtctgctggtg
gcctgctgtctcgcagacatatttaggatttacgccccggaggcgccctacacctctcca
gataaactcaaggacattttcatgttcatcacacgacagctcaaaggactggaggacacg
aagagcgcgcagttcaacagatacttctacttgctcgagaacatagcctgggtgaagtcc
tacaatatttgctttgagcttgaagacagcaacgagatattcacccagctttacagaacg
ctcttccaggtcatcaacaacggccacaaccagaaagtgcacatgcatatggtggacctg
atgagttccattatctgcgagggagacactgtatcgcaggagctgttggacactgtgttg
gtcaacctggtgccagcacacaagaatttgaataaacaagcctatgacctggccaaagct
ctgctgaagaggactgctcaagcaattgaaccttacatcaccaatttcttcaaccaggtg
ctgatgctgggaaagacctcagtcagcgatctgtctgaacacgttttcgacctcatcttg
gagctctacaacatagacagccacctgctgctctcagtgttgccgcagctggaatttaaa
cttaagagtaatgataatgatgagaggctgcaggtggtgaagctgctggctaagatgttt
ggagccaaggactccgagttggctgcgcagaacaagccactttggcagtgttacctgggc
cggtttaatgacatccatgtgcccatcagactggagtgtgttaagttcgccagtcattgt
ctcatgaaccacccagacctggccaaagacctcacagaatacttgagggtcagatcacat
gacccagaggaggccatccgccatgatgtcattgtctctatagtaaccgctgccaagaaa
gacctgtctctagtcaatgatgcattgctgaattttgtaaaggagagaaccttggacaaa
agatggcgtgtacgtaaggaagctatgatgggcctggcatcaatctacaggaagtactca
ctgcagggagaaggagggagggaggcctctaaacagatttcctggatcaaagataagctg
cttcatatctactaccagaacagcattgatgacaggttgctggtggagcgggtctttgcc
caatacatggtccctcacaacctggaaacctctgagagaatgaagtgtctttactacctg
tatgccacactggacacgaatgctgtcaaggctctgaatgagatgtggaagtgccagaat
ctgttgagacaccatgtcaaagacctgctggacctggtcaaaaaacccaagtctgaagca
tccagcaaggctgtgtttgccaaagtcatggtgatcacaaggaacttgccagacccgggc
aaggctcaggactttgtgaagaagttggctcaggtcctggatgatgacgagcgaatcaga
gatcagttggaaaccttggtcagcccctcctgctcctgcaagcaggctgaagtgtgtgtg
cgagacatcactaaaaagcttggcagccccaaacagcccagcaatccattcctggaaatg
gtcaagttcctgctggagaggattgctcccgtacacatcgacacggagtccatcagtgct
ttgataaaacaggtaaacaaatccatagatggaacggctgatgatgaggaggagggcgtt
cctactgaagaggccatcagagcaggactggaactgctgaaggttctgtcgttcacacac
ccggtgtcgttccactcggcagagacgtttgagtctctgttgggctgtctgaaaatggac
gacgagaaggtggctgaagctgcgctgcagatcttcaagaacacaggcagcaagatggaa
gaaagtttccctcacatcaaatccgttttactgccggtactgcaggccaaagcgaagaga
ggccctccacgccaggccaagtatgccatccactgcatcaacaccatgttcaccaacaga
gacacacactttgcccagatctttgagccccttcacaaaggcctggaccctgctaacctg
gagcagctcatcactcctttgactaccctgggtcacctggcccagctcgccccagaacag
tttgctgcaccgctcaaatctctagtcgccaacttcattgtgaaggacctgctcatgaac
gacaggatcccgggcaagaagacaaccaaactctgggttcctgatgaggaagtgtcccca
gagactctggccaagatccagggcataaagttgatggtgaggtggttacttggagtgaag
aacaaccagagcaaatcaggcaactccaccttgaggatgctgactgctattctacacagt
gatggagacctaactgagcagggcaggatgggtaaaccagacatgtcccggctgcggctg
gcagcagcatgcgccctgctgaagctggcacaggagccctgctatcacgaaatcatcaca
ctggagcagtatcagctgtgtgctctcgtcatcaacgacgagtgctaccaggtgcgacag
tgtttttcccagaagcttcatcgcggcctgtgtcgcctccgtctgccgctggaatacatg
gcggtgttcgctttgtgcgccaaggaccccgttaaggagcggagggctcacgctcgccag
tgcctggtgaaaaacgtcaacatacgcagagagtacctcaagcagcatgctgccataagc
gacaagctgttctctctgctgccggagtacgtggtgccctacaccatccacctcctggca
catgacccagactacgtcaaagtacaggacattgagcaactcaaagaaattaaagaggct
ctgtggtttgtccttgagattatcatggccaagaatgagaacaacagtcacgccttcata
agaaagatggtggaaaatatgaaacagacaaaagatgcccaggcccccaccgatcccaaa
accaacgagaaactctacacagtgtgtgatgtcgccatgcacatcatcatgtctaagagc
accacctacagcctggagtccccaaaagacccggtgctgccctcgcgcttcttcaccaaa
ccagacaagaatttcagcaacacgaaaaattacctcccgccagagatgaaagttttcttc
actcctggaaagcccaagtcagccaacgttttgggtgccgtgaacaagccgctgtcgacg
gcaggcaaacagctccagagtaaagcttctcgtatggagaccgccagtaacgaagacccc
tcgtccaaccccggctccccacagcggagcaaaaccaggcttgacagcacagagatggat
cacagtgaaaatgaggacatcagcctaaagagagcagacagtgttgacaaggatatcgaa
aagccccgcggtcgcaagcggggcgtgacctccggtgacgaccaggagagcaaaccaaag
cgtggacgcaagaaggcggcagccaacacgcctgcagcagccgagtccgaggaccagtgg
gacgaggacacccggccggaggacgaacagaacagcccgccgaaaaaaggacgcaggggc
cgaccaccgaagtctgccactcccaatcaggacacaccttccaaggggaggagggggcga
aagaaggcagctcctccgccagaggaggaagaggaggaggaggaggaagaagaagagagg
gtagaagaggaggcggcggcggcggcagaggttgaagacgaagaggacgacgggagcagt
gaaaatatggaggcgaagccgaagggaggaaggcaaaccagagcgccgcggcggtcacag
ggcagcacggaagcagcggaggctacaccacagaagaggagagggcgtcctcccaaatca
gctcagccggctgccaagaaaccagcacgtggtggccggtcgaaggcagctgcctctaaa
gacgactccgaggaagaggacgaagaggaggaggaggagcaggaggacgagccaacaccg
aagggtcgcaagaaggcagctggacgaagaagatga
DBGET
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