Embiotoca jacksoni (black perch): 138196327
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Entry
138196327 CDS
T10523
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03030
DNA replication
eja03410
Base excision repair
eja03420
Nucleotide excision repair
eja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138196327 (rfc3)
03410 Base excision repair
138196327 (rfc3)
03420 Nucleotide excision repair
138196327 (rfc3)
03430 Mismatch repair
138196327 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eja03032
]
138196327 (rfc3)
03036 Chromosome and associated proteins [BR:
eja03036
]
138196327 (rfc3)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138196327 (rfc3)
DNA replication proteins [BR:
eja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138196327 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
138196327 (rfc3)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138196327 (rfc3)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138196327 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
138196327 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA
AAA_22
nSTAND6
AAA_11
AAA_16
ABC_tran
Sigma54_activ_2
MTC2_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
138196327
NCBI-ProteinID:
XP_069002347
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDFHKDQAAKLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNASDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIRSRCL
AVRVPLPSAEEVCSVLTSVCKKEGLVLPPELAKLISEKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWEVYLRETANAIVSQQSPQRLLEVRGRLYELLTHCIPPDIIMKGLVKELL
NNCDGQLKTEVAHMAAYYEHRLQLGNKAIYHLEAFIAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgggtggataaatatcgaccgacttccctcgggaaactggactttcataaa
gatcaagcggccaagctgaaaaacctggttcaatgtggcgacttccctcacttgttggtg
tacggtccgtccggcgcagggaagaagacccgtatcatgtgtctgctgagggagctgtat
ggagccggagtggagaagctccgtatcgagcaccagaccgtcgtggctccctccaagaag
aaaattgagatcaacacgatagccagcaactatcatttggaagtcaacgcaagtgacgca
ggaaaccaggaccgtgtggtgattcaagagttgatcaaaactgtggctcagtctcagcaa
atccagtcgagcacccagagagagttcaaagtggtgttgctaacagaggtggacagactc
acgaaggacgcccagcatgctttgcgtcggacaatggaaaagtacatggccacctgccgc
ctcatcctctgctccacctccacctccaaagtcatcgggccaattcggagccgttgcctg
gctgtcagagttcctctgccgagcgctgaagaggtgtgtagcgttctgacatcggtctgt
aaaaaggagggtttggtcctcccacccgagctggccaagcttatcagtgagaagtctggt
cgcaacctccgcaaagccctgttgatgtgcgaggcctgcagagtgcagcagtatcctttc
tcagcggaccaagacgtcccggagacggactgggaggtctacctcagagaaacagctaat
gccatcgtcagccagcagagtcctcagaggttgttggaggttcgaggccggctgtacgag
ctgctgactcactgcattcctcctgatattatcatgaagggtctggtgaaagagctgctg
aataactgcgacggtcagctgaagacagaggtggcccacatggcagcctactacgaacac
agactacagctgggcaacaaggctatctaccacctggaggccttcatcgccaagttcatg
gccatctacaagaagttcatggaggatgggctggatgctatgatgttttga
DBGET
integrated database retrieval system
