Embiotoca jacksoni (black perch): 138196340
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Entry
138196340 CDS
T10523
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138196340 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138196340 (exosc8)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138196340 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138196340
NCBI-ProteinID:
XP_069002388
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKMGNTTIIC
GIKAELSYPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIK
TEDLCIDRGKLCWVLYCDMMCLDYDGNILDACIIALLAALKNTQLPEVTINKETCTPQVN
LKKRCGLHIHKHPVGASFGVFDDSIVIVDPTAEEESLSTAHLTVVTDEEERLCSVHKPGG
TSLSAEKLQECISRAAARQREIQKLIDKVIRSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgcagagcctctggagtaccacaggagctttctgaaagaa
aactgccggcccgatggacgggagctgtccgagttcagaaccacaacactgaacatcggg
tccatatccacagcagatggctcggcgctggtgaagatgggaaacaccacgatcatctgt
ggaatcaaagcggagctgtcatacccgacagtggaggcacctggcaaaggatacatagtg
cccaacgtggacctcccgccgctgtgttcctctcggtttcggccgggcccgccgggagaa
caggcccaggctgccagccagttcatcgctgatgtgatcgaaagctctgaagtgataaaa
acagaggacttgtgcatcgacagaggaaagctctgctgggtgctctactgcgacatgatg
tgtctcgactacgatgggaacattcttgatgcttgtatcatcgccctgctggctgccctg
aagaacacacaactcccagaggtcaccatcaacaaagagacgtgtacaccgcaggtgaat
ctgaaaaagagatgtggtctgcatattcacaaacatccagttggtgcttctttcggtgtc
tttgacgactccatagtgatcgtagaccccacagctgaggaggagagtctgtcgacggct
catctcaccgtggtgaccgacgaggaggagcgactctgctctgtacacaagccaggcggg
acctcgctgtcggcagagaagctgcaggagtgcatcagccgggcagcagcacgacagaga
gagatccagaaactcatcgacaaagttatacgtagtgtgaagacagcgcaatga
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