Embiotoca jacksoni (black perch): 138196350 Help Entry 138196350         CDS       T10523                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism eja  Embiotoca jacksoni (black perch) Brite KEGG Orthology (KO) [BR:eja00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:eja04515]     138196350 (dchs1b) Cell adhesion molecules [BR:eja04515]  Cadherins   Cadherin related    138196350 (dchs1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 RET_CLD1 Cadherin_4 TMEM154 Cadherin_C_2 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  138196350 NCBI-ProteinID:  XP_069002409 LinkDB All DBs Position Unknown AA seq 3306 aa AA seqDB search MPITSKGSRRRAWINGSCVCSSLWPRKPLFYFCIILVLVQSTTVLGALELQLDEEQPAGT IVGDISAGLPPGETASLYFISDHEGTGVGSDLNIEETTGIITTARRLDREQRDHYSFIAV TMTGITIEVSITVNDINDHAPVFPKKKVTLKIPEHTAVGTRFSLEPATDADKDQLTTQGY AIREGNVGQIFKLETKRGANKVLYLDLVVNGLLDREKRSLYTLVLEAFDGGSPRRMGSMT LDVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSD PDRYFVIDVKSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPKISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI IYLIYVDEVLDREERDSYELRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQT IPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKSSHSDWFLIDPVTGIITTATALDFE SEPAPSVTVVATDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASIKENTPAGTCFLE VSATDEDRGSFGAIAYTLGSGSGGTVPTHFTIDKETGQLCTSTALDRDEGLDKFDLTVTA TDGGGLSSVASVRVYVVDINDNRPSFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGDNGR VTYRTVPGGGSTFFTLNKDTGVISLSRSLHGKANTVISMVISAEDGGGLMAPVNAKVNVS VVGGSVASPVFEQAQYFFTVSEDVLRGTAVGVVRAATKTGASKGIFYSISSGDPDGYFTV DSASGTIRTALPLDHETCSSLDLEIQARSGSPPAYGTSRVRITISDINDNAPTFLPSSSE SLLLPEITKMGAVIYRIQATDKDSGHNGQLSFDLVSAGAAGSSGQRTFGVDRGSGEVRLI GSLSYESVPRYDLQVVAKDGGVPQLSSTFTLVVHIQAHDAQGPNFDTLTYRVELRENTPL NTRFLQVRALNREASGNGASSSSSSSSSSISYRLRPDGDAAGFGIMPDSGWLFVRSSLDR EVKDMYLLTVLATSGPGGAGRTGSAAVRVTVTDENDNSPRLSQERVFLAVRENLLAGTGF GRVSATDRDAGLNARLTYRLLHTDRHFQINSQTGEISTRLALDREQQSSYQLVVVVQDGG TPPRSATGTAHITVLDENDHAPSFTHARPDRELLLQVMEGLLSGTVLGTVTAKDPDEGEN GTIFYSLSGSRAERFSLNPNSGELRTTSPLRWAERAEYAFTVTAADLGTPGLSSTCQLQI QVLSSSRSIPKPNILSMTLNTVEGAAPGSIIGSVRPLDQHESAVLEGQVTYLVVGGTDRD GTFMVDRLKGDVYLVRELDYEKGSRYTLHIEVSDFSQAFPSSHLVKLDINVQDSNDHAPQ FTEDPVTIVIPENIEPGASIYTFQAVDQDGSGPNSELRYSIEHHWPDTPDLLTLDPSNGV LSLGQKLDRESTPSLYLVVRATDQAEDLSQRRWGSVTARVFVTDENDNAPVFSSPSAVSV MEDQPVGFVILYVMARDEDEGENGRVSYKIQAGNSAGRFSLNPNTGSLSILKALDREEQE VFNLTIIAEDHGIPQLSTSQVLCVHVIDVNDEAPVFQRAEFETQVMENQGPGTTVLTVTA TDRDLGSNGHITYGGVTEEGFIINPVTGVITTTKELDAELQDHYTLTVYARDGGLPPNFA KAVVRVEVQDVNDNAPVFAKSWYGLDVPENQAPVELCFLKATDPDSGPGGELKYRISAGN PDGDFHLHASTGALSTSRGLDREAKAEYILEVVATDQGSPALSATVTVEVKVLDVNDNSP VFTKSSYSVEVSEDAAEGSLVLEVSATDVDDDLNGKVLYFLSREAHGAFTVDENTGRITT SAPLDREKWASYSLQVFAVDLSPAAPRNISAQVTVTILDVNDNTPFFIQDPLVIEVSSRR SQRVLAAMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATEPLGDLTQAQRTLIVE AMDQGSPAQSAQGVVVIYVKEVEYSGIRFSRNARDVSIQENASKGTAVAQAQAQHPDGTR KGISYSLFSGNRKQAFSISSLSGEILVQSSKGLDFEDTPRLRLVVKAETVSSTSFMAINL ILQDINDNLPRFQLQNYVAYMKEAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSSSMSGLF KIDPVTGSITTAAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIVDQNDNSPTIPLP QEVRIPENTLIGTEITLVTGNDVDSSPALSYSLQLDPTALGKFGIHRYSGGVSLTAALDF EEKTWYTLTVRATDSQHQTEANITILVEDINDNAPAFTHDLYQITLPEHTPPGSSVITVT ATDRDSGENGKITYRVMSSTQEGFHIDPSNGTLFINHRVEFDPERPSVSIVIEARDGGSP SLSSLTTVQVQISDVNDNAPVFHQSEYRATVSEDTIPGSTVLTFEAFDSDLSRENCGFDF AIADGNEGNAFQIESSVRYLEGRGFQTVGTLLLAEGLDFETKPLYNLIVVVSDRGVPQRS SSVAAVITIGDVNDNPPVFSRAEYTVSLSEGAAAGTEIIRLTATDPDSTPNGEVQYTISS GDEVNLFTMDQWTGALRLQQALDREHQSTHIIIVQATDGRGHFALAPVIVEVKDVNDNHP FFPVEVLTASIRENQPANSAVTVLHAIDHDTGFFGQLKYYMVERSGAGKDSFAVDQNSGE IRSKTPFDFEKVNSFNFVALAVDSGNHSATVTIQVFVTGEDEYDPLFTSSEFSLEVPEGA KKGQSIGQVQANDEDGGVDGIVLYSLTASSPYFDVNKTTGVIFLKLDSSGSSSSSGSGRA KRETRLMNVDVRAHSPLDTSRTTTAQVSIDVTNTNFGLVTDVNILLISIIAVSLGFIILL VVMAVVVFLVKSRRRKKAQDTGNRTVASGTALKKLDDCNSGPGGERIYHQALPGYAGDQG GAGGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSG IQQDADQLSDISCEPAALEGSTWFKGKKLGGSLTGTLLSGQLPVYRDEGGGYLGVGRGLN ISLPKDYPFPEDGKPLVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARL KDETAQQSQNPRQPFQPKPKMDPKPRIDPPPLITSVAHPGAMSVPPKVPVIGRTFPHLAS LRRSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVNQGPSASMISTREPSLDQSP DHEMRI NT seq 9921 nt NT seq  +upstreamnt  +downstreamnt atgccgataacaagtaaagggtcaagacggagggcttggatcaacggatcctgtgtgtgt tcaagtctctggccacggaaaccgctcttttatttttgcatcatccttgtcctggttcag tcaacaactgttcttggagcactggaactccagctggatgaagagcaacctgcagggacc attgttggcgacatcagcgccgggttaccgcctggtgaaactgctagtctttacttcatc tctgaccatgagggcacaggtgttggcagcgacctcaacatcgaggagaccacgggcatc attactaccgcacgccgtctggatcgcgagcagagggaccactacagcttcatcgccgtg acaatgacaggtatcactattgaggtgtcaatcactgtcaacgacatcaatgaccacgca cccgtgttccccaaaaagaaagttactctcaagatccctgagcacaccgcggtggggaca aggttttccctggagcccgcgactgatgcagacaaggaccagctgaccacccaaggctat gctattcgagagggcaatgtaggccagatattcaaacttgagactaagagaggtgctaac aaggtgctgtatctagacctggtggtcaatggactgctggacagagagaaacgctcatta tacaccctggtcctggaggcctttgatgggggctcacctagaaggatgggctccatgacc ctggacgtcacagtgactgacatcaacgatcatgccccggtttttaatcagagcagatac cacgctattatctctgaaagtctcccacaaggaagtagtatcttgcaggtgtttgcgaca gatgaggatgaaggcgataatggtctggtgctttatgaaatcaaccgccgtcagagtgac cctgaccgttactttgtcattgatgtaaagtcaggggtcatcaccctgaatagacccctg gactatgagctgaagagggtccatgaactcgtggtccaggccagggataatgccagtcac cctgaggtgaccaacgcctttgtgaccattcatgtccgtgactacaatgacaaccagccc accatgaccatcatcttcctcagtgaggatggctctccaaaaatctcagaaggagcccag ccgggccagtacgtagctcggatatctgtcactgaccccgattatggagagtatgccaac gttaatgtgtcccttgaggggggtgatgggaagtttgctctgacaaccaaggacagcatc atttacctgatatatgttgacgaggtcttggacagagaggagcgggattcatatgaactc agggtgatggccacagactctggcacacctcccctcagggcagagtcctctttcaccatc caggtgactgatgtcaatgacaacccgcctctgtttgaccagcaggcatacagacaaacc atacctgaggttgtgtatcctggatccttcgttcttcaggtcactgccagggacaaagac cagggccccaatggggacgtgcgatatagcctactaaagggcaaaagctcccactctgat tggtttttgatcgacccagttacaggtatcattaccactgcgactgctctggactttgaa tcagagccagctcctagtgtgactgtggtcgcgacggatagcggccgtccgcctctgtca tccacggcgaaggtggacattgtgctgcaggatgtaaatgacaacacccctgtgttctcc agcaacttctataatgcctccattaaagagaacaccccagctgggacctgcttcttagag gtgtcagccacagatgaggaccggggttcctttggcgctatagcctacaccctggggtcg ggctccggaggcacagtgccaactcactttaccattgacaaggagactggccagctttgc accagcacagcactggacagggatgagggattggacaagtttgacctgactgtcactgca acagatggaggtggtctgagctcagtagccagtgtgagggtctatgtggtggacatcaat gacaaccggccctccttttatccagtcctgtacacagtcagtctcagtacccatagtgcc ccaggaacctctgttgtcaaggtaacagccaatgacccagacgcaggagataacggcagg gtgacctaccgtacagtacccggaggaggctccacgttctttacgctcaacaaggacaca ggtgtgatttctctctcccgctcgctccatggcaaagccaacacggtaatctccatggtg atatcggccgaagatggcggcggtctgatggcaccagtcaatgccaaagtgaacgtgagc gtggtgggaggctcagtggcgtctccagtctttgaacaggcgcagtattttttcactgtg tccgaggacgtcctgagggggacggcagtgggagtggtccgcgctgctaccaagacaggt gcctctaagggtatcttctactccatctcttctggagatcctgatggttacttcacagtg gacagcgcctctggcaccattcgcacagcccttcctctggaccacgagacctgctccagt cttgacctggagatccaggcacgctccggctcccctccagcgtatggaaccagtcgcgta cgcattaccatctcagacatcaatgacaacgcccccaccttcctcccctcctcatcagag tccctgcttttacctgagatcaccaaaatgggagctgttatctaccgtattcaggccact gacaaagactctggtcataacggtcaactaagtttcgacctcgtctccgctggggctgca ggcagcagcggacagaggacgtttggtgtggaccgtggcagtggggaggtgcgtctgatt gggagcctgtcatatgaaagtgtcccacgctatgaccttcaggtggttgccaaggatggc ggagtgcctcagcttagctccaccttcacccttgtggtccacatccaagcacatgacgca caaggccccaactttgacaccctgacctatcgcgtggagcttcgggaaaacacacctctc aacacgcgtttcctccaggtccgagcactcaacagagaggcctctgggaatggtgcaagc tcctcttcatcatcttcctcctcctctatttcctaccgcctcaggcctgatggtgatgct gcaggttttggcatcatgccagatagtggttggctgtttgttcggagctctctggaccga gaggtcaaagacatgtacctactaaccgtcctcgccacgtccggcccaggaggggcgggg aggaccggcagcgccgctgtcagggtgacagtgactgacgagaacgacaattccccacga ctgagccaggagagggtgttcctggctgtcagagagaacctgctggccggaacaggcttt ggcagggtgtctgcgacggacagagatgcaggactaaatgctcgactcacctacaggctg ctgcacactgacaggcactttcagatcaactctcaaacaggtgaaatcagcacccgcctt gctctggacagagagcaacagtctagctatcagctcgttgtggtcgtgcaggacgggggt acgcctcctcgcagtgcgactggtaccgctcatatcacagtgctggatgaaaatgaccac gcccccagtttcactcatgccaggcctgacagggagctgctgcttcaggtgatggagggg cttctatctgggaccgtcttggggacagtcacagctaaagacccagacgagggagagaat ggcaccatattctactctttatcaggctccagagcagagcgtttctccctcaacccgaac agtggtgagcttagaaccacgtcccctctaagatgggcggagcgagccgagtacgccttc actgtaactgctgctgacctcggcacaccaggcctcagctccacttgccagctccagata caggttctcagctcctccaggtccatccccaagcccaacattctctctatgaccctgaac acagtcgaaggggctgctccgggctccatcattggttcagtccgcccacttgaccagcat gaatctgctgtattggaaggccaggtgacctacctggtcgtggggggtacagaccgcgat gggactttcatggtggaccgtttaaagggcgatgtgtacctggtacgcgagctggactac gagaaggggtcgaggtacacgctgcacatcgaggtgtctgacttctcccaggcatttccc agcagccacctggtgaaactggatatcaacgtacaggacagcaatgaccacgccccccaa ttcacagaggaccctgttactattgtgataccagagaatatagagccaggggcttccata tatacgttccaggctgtggatcaggatggcagtggacccaacagtgagctacgttactcc atcgagcaccactggcccgacacccctgacctcctgaccctcgatccttccaacggagtc ctgtcccttggccagaagttagatcgtgagtccacaccctccctctaccttgtggtgcga gccacagaccaggcagaggatctttctcagaggcgctggggatcagtcactgctcgggtg tttgtgacagacgaaaatgacaatgctccggtcttcagctctccgtctgcggtcagcgtc atggaggatcaacctgtagggtttgtgattttgtacgtgatggctcgagatgaagatgaa ggagaaaatggcagagtatcatacaaaatccaggcaggcaacagtgctggtcgcttcagt ctgaaccccaacactggctcactctcaatcctcaaagccttagaccgggaggaacaagaa gtgttcaatctgactattatagcagaggatcatgggatacctcagctctccacttctcag gtgctgtgtgtgcatgtgattgacgtaaatgacgaagctccagttttccagcgggcagag tttgagacccaggtgatggaaaaccaaggaccaggcaccacagtactgacagtaactgcc actgaccgggacctaggctctaatggtcatataacatatggaggtgtgacagaggaaggc ttcatcatcaaccctgtgacgggagtcatcaccaccacaaaggagctggacgcagagctg caggatcactacacactcactgtgtatgccagggatggagggctgcctccaaattttgcc aaggctgtcgtccgtgtggaagtgcaggatgtgaatgacaacgctccggtctttgcaaag tcatggtatggcctcgacgtgccggagaaccaggcccctgtagagctttgcttcctcaag gccacagacccggactcaggtcctggtggagagctgaagtacagaatctctgcgggcaac cctgacggagattttcatctccacgccagcacaggagccttgtctacctcacgtgggctt gacagggaggcaaaggcagaatatattctggaagtggtggccacagaccaaggcagccct gctctcagcgccaccgtcacagtggaagtcaaagtgcttgatgtcaatgacaacagccct gtctttaccaaaagtagctactcggtggaagtgtcagaggatgctgcagagggatcccta gttctggaggtgtcagccacagatgttgatgatgacctcaatgggaaggttttatatttc ctcagccgagaggcacacggagcgttcactgtggatgagaacactggtcgtatcaccaca tccgcccctctggaccgggaaaaatgggcgtcatacagcttacaggtgtttgctgttgac ctttcacctgctgcacccaggaacatctctgctcaggtgacagtcaccatcctagacgtc aacgacaacactcccttcttcatccaagatccgttggtcatcgaagtgtccagcaggcgt tcccagcgggttttagccgccatgaaggctgaggacaaggactttggagccaatggttct gtgttttaccgttttgccaccccagtgaagggtttcagcatcaactccctgactggggag atccaggccactgagccactgggagatctgacccaggctcaacggaccctgatcgtggag gccatggaccaaggcagcccagctcagtctgcacagggggtggtggtgatttacgtgaaa gaggtggagtacagcggcattcgtttctcgaggaatgctagagacgtcagcatacaggag aatgcatcaaaaggcacagctgtagcgcaggctcaggctcaacatccagatggcacacgt aaaggtatcagctacagtctcttcagcgggaacagaaagcaagccttcagcatcagctcc ttatcaggtgaaatcttggtgcagagctcaaagggactcgactttgaagacaccccgaga cttcgtcttgtcgtgaaggctgaaacagtgtcctccacatccttcatggctattaacttg atcctgcaggatatcaatgacaaccttcctcgcttccagctgcagaactatgtggcctac atgaaagaagcacaaggatatgaaatgccaatcatacaggttgttgctgaggatgtggat cagggccaaaatggtcaggtgacctactccatccagtcatccagcatgagtggcctgttc aagatcgaccctgtgacaggaagcattaccacagcagccatcatggaccgtgagattttc acccagaccaagctcgtagttacagcaactgatagaggaagcccacgattggctggttca gccacactgacagtgatcattgttgaccagaatgacaacagtcccactattcccttgccc caagaagtccgcatcccagagaataccttgataggaacagagatcactcttgtgaccggt aatgacgtcgactccagtcctgccctctcctactctttgcagctggacccaacagctttg ggcaagtttgggattcaccgctacagtggaggggtgtcactcactgccgctctagacttc gaggagaagacgtggtacaccctgaccgtcagagccacagacagccagcaccaaactgag gctaacattacaatattggtggaggatattaatgacaatgcacctgcattcacccatgat ctctatcagattactctgcctgagcacacaccaccaggaagttcagttatcacagtaaca gcaactgacagggactctggagagaatggaaagatcacctacagagtgatgtcatcaacc caagagggcttccacatcgatcccagcaatggaaccctgtttattaatcacagagttgag tttgaccctgaacgtccgtcagtcagtattgtcatcgaagcgcgtgatggaggctcgcct tcactctcctcgctaaccacagtccaggttcaaatctctgacgtcaatgacaatgctcct gtgtttcatcagtcagagtacagggctacagtttctgaggacaccatcccagggtcaaca gttctgacttttgaggcctttgacagcgacctatcacgagaaaactgtggcttcgacttt gctatcgccgacgggaatgaaggaaatgccttccagatcgagagcagcgtgcggtacctg gagggacggggatttcagacagttgggaccctattgttggctgaggggcttgactttgaa accaagccactttacaacctcattgtggtggtgtcagaccgtggtgtgccccagaggagc tccagtgttgctgcagtaataaccattggtgatgtgaatgataatcctccagtgttcagc agagcagaatatactgtgtcactgagcgagggagctgctgctgggactgagatcatacga ctgactgctacagacccagactcaactcccaatggtgaagtccagtatactatcagctct ggtgatgaagtgaacttattcactatggaccagtggactggagccttgcggcttcagcaa gcacttgatcgtgagcaccagtccacacacatcatcattgttcaagccacagatggacgg ggtcacttcgcgctagctccagtcattgttgaggtcaaagatgtaaatgacaatcatccc tttttccctgtggaagtcctcacagccagtatcagggaaaaccaacctgcaaactctgct gtgactgtcctacacgccatagaccatgacacagggttttttggccagctcaagtattac atggtggagcggtccggggcaggaaaagacagctttgctgtggaccagaattccggagaa atccgaagcaaaactccttttgactttgagaaggtcaactcctttaattttgtagcattg gcagtagattcaggaaaccattcagccactgtgaccatccaggtgtttgtcacaggtgag gatgagtatgacccactcttcacatcctctgagttttcccttgaagtcccagagggagcc aagaaaggccagagcatcggccaggtgcaagcaaatgatgaggatggaggggtggatggt attgttctctattctcttaccgccagctctccatattttgacgtaaacaaaaccactggg gtgattttcctcaagttggacagctccggcagcagtagtagcagtggctcaggccgggct aaacgggaaaccagattgatgaatgtggatgtgagagctcacagtcctctagatacatct cgcactactacagcacaggtctctattgatgtcacaaacaccaactttggcctggtcacc gacgtcaacatccttcttatcagcataattgctgtgtctcttggttttatcatattgctt gtggtcatggccgtggtggtgttcttggtcaagtcacgaaggaggaagaaagctcaagat acaggaaacagaactgttgcctcgggaactgccttgaagaaactggacgattgcaactca ggaccaggaggagaaagaatctaccaccaggccttgccaggctatgctggagatcagggt ggggctggtggaggtccctacactagagggggctctttggatccctctcactccagcggg agaggatcagctgaggcagcagaggatgatgagatcaggatgataaatgagtatccccgt gtcgcctccatcacctcgtccatgcaggagcacatctcggccaggggaccagactctgga atccaacaggacgctgaccagctgtctgatatctcttgtgagcctgcagctttggagggc agcacctggttcaaaggaaagaaactgggaggcagtcttactgggaccttgctctctggc cagctccccgtctacagggacgagggaggtggctacctgggagttggccgtggtctcaac atttccctccccaaggattaccccttccctgaggatggtaaacctttggtggatggttcc ctcacagctatcgttgccagtgatgaggagcttcgtggaagctataactgggattactta ctcaactggtgccctcagtttcaacctctcgctaatgtcttcacagaaattgctaggctg aaagatgaaactgctcaacagagtcagaaccctcgccaacctttccagcccaagcccaaa atggatcccaaacccagaattgaccctccaccactcatcacatcagtggcccacccaggg gccatgtcagttccccccaaagtccctgtgattggtcggacattccctcacttggcctca ctccgtagatcccctatcagccatgagggatccatttcatcagcagcaatgtcgccaagc ttctccccatctctttcccctttggcagctcgatctccagctgtttctccatttggagtc aaccaagggccctcagcatccatgatcagcaccagggagccctcactagaccagagtcct gatcacgagatgagaatatga

DBGET integrated database retrieval system